This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2d95
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==LOW-TEMPERATURE STUDY OF THE A-DNA FRAGMENT D(GGGCGCCC)== | ==LOW-TEMPERATURE STUDY OF THE A-DNA FRAGMENT D(GGGCGCCC)== | ||
| - | <StructureSection load='2d95' size='340' side='right' caption='[[2d95]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='2d95' size='340' side='right'caption='[[2d95]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2d95]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D95 OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[2d95]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D95 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D95 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d95 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d95 OCA], [https://pdbe.org/2d95 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d95 RCSB], [https://www.ebi.ac.uk/pdbsum/2d95 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d95 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | The structure of the A-type duplex d(GGGCGCCC) was determined from data measured at 115 K to 2.0 A resolution. The space group, P4(3)2(1)2, is the same as for the 293 K structure; cell dimensions are a = 42.74 (4), c = 24.57 (1) A; R = 0.21 for 1694 observed reflections. The conformation and hydration are similar at the two temperatures. The average displacement parameters (B) for bases, sugars and phosphates all decrease by about 9 A2 relative to those found at 293 K. The individual values of B1/2 are linearly related to the distance from the molecular center of mass. | ||
| - | |||
| - | Low-temperature study of the A-DNA fragment d(GGGCGCCC).,Eisenstein M, Hope H, Haran TE, Frolow F, Shakked Z, Rabinovich D Acta Crystallogr B. 1988 Dec 1;44 ( Pt 6):625-8. PMID:3271557<ref>PMID:3271557</ref> | ||
| - | |||
| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| - | </div> | ||
| - | <div class="pdbe-citations 2d95" style="background-color:#fffaf0;"></div> | ||
| - | == References == | ||
| - | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Eisenstein | + | [[Category: Large Structures]] |
| - | [[Category: Frolow | + | [[Category: Eisenstein M]] |
| - | [[Category: Haran | + | [[Category: Frolow F]] |
| - | [[Category: Hope | + | [[Category: Haran TE]] |
| - | [[Category: Rabinovich | + | [[Category: Hope H]] |
| - | [[Category: Shakked | + | [[Category: Rabinovich D]] |
| - | + | [[Category: Shakked Z]] | |
| - | + | ||
| - | + | ||
Current revision
LOW-TEMPERATURE STUDY OF THE A-DNA FRAGMENT D(GGGCGCCC)
| |||||||||||
