2cwa

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:31, 22 May 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure Of The Single-stranded DNA Binding Protein From Thermus Thermophilus HB8==
==Crystal Structure Of The Single-stranded DNA Binding Protein From Thermus Thermophilus HB8==
-
<StructureSection load='2cwa' size='340' side='right' caption='[[2cwa]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
+
<StructureSection load='2cwa' size='340' side='right'caption='[[2cwa]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2cwa]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CWA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CWA FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2cwa]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CWA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CWA FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.96&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cwa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cwa OCA], [http://pdbe.org/2cwa PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cwa RCSB], [http://www.ebi.ac.uk/pdbsum/2cwa PDBsum], [http://www.topsan.org/Proteins/RSGI/2cwa TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cwa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cwa OCA], [https://pdbe.org/2cwa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cwa RCSB], [https://www.ebi.ac.uk/pdbsum/2cwa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cwa ProSAT], [https://www.topsan.org/Proteins/RSGI/2cwa TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/SSB_THET8 SSB_THET8]] This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair (By similarity).
+
[https://www.uniprot.org/uniprot/SSB_THET8 SSB_THET8] This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cw/2cwa_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cw/2cwa_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cwa ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Single-stranded DNA-binding protein|Single-stranded DNA-binding protein]]
+
*[[Single-stranded DNA-binding protein 3D structures|Single-stranded DNA-binding protein 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Thet8]]
+
[[Category: Large Structures]]
-
[[Category: Kuramitsu, S]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Structural genomic]]
+
[[Category: Kuramitsu S]]
-
[[Category: Satoh, S]]
+
[[Category: Satoh S]]
-
[[Category: Yokoyama, S]]
+
[[Category: Yokoyama S]]
-
[[Category: Dna binding protein]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Single-stranded dna binding protein]]
+
-
[[Category: Ssb]]
+
-
[[Category: Thermus thermophilus hb8]]
+

Current revision

Crystal Structure Of The Single-stranded DNA Binding Protein From Thermus Thermophilus HB8

PDB ID 2cwa

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools