2k21
From Proteopedia
(Difference between revisions)
(3 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
+ | |||
==NMR structure of human KCNE1 in LMPG micelles at pH 6.0 and 40 degree C== | ==NMR structure of human KCNE1 in LMPG micelles at pH 6.0 and 40 degree C== | ||
- | <StructureSection load='2k21' size='340' side='right' caption='[[2k21 | + | <StructureSection load='2k21' size='340' side='right'caption='[[2k21]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2k21]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2k21]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K21 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K21 FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k21 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k21 OCA], [https://pdbe.org/2k21 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k21 RCSB], [https://www.ebi.ac.uk/pdbsum/2k21 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k21 ProSAT]</span></td></tr> |
</table> | </table> | ||
+ | == Disease == | ||
+ | [https://www.uniprot.org/uniprot/KCNE1_HUMAN KCNE1_HUMAN] Romano-Ward syndrome;Jervell and Lange-Nielsen syndrome;Familial atrial fibrillation. The disease is caused by variants affecting the gene represented in this entry. The disease is caused by variants affecting the gene represented in this entry. | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/KCNE1_HUMAN KCNE1_HUMAN] Ancillary protein that assembles as a beta subunit with a voltage-gated potassium channel complex of pore-forming alpha subunits. Modulates the gating kinetics and enhances stability of the channel complex. Assembled with KCNB1 modulates the gating characteristics of the delayed rectifier voltage-dependent potassium channel KCNB1 (PubMed:19219384). Assembled with KCNQ1/KVLQT1 is proposed to form the slowly activating delayed rectifier cardiac potassium (IKs) channel. The outward current reaches its steady state only after 50 seconds. Assembled with KCNH2/HERG may modulate the rapidly activating component of the delayed rectifying potassium current in heart (IKr).<ref>PMID:19219384</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k2/2k21_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k2/2k21_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k21 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
Line 29: | Line 34: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
- | [[Category: George | + | [[Category: Large Structures]] |
- | [[Category: Kang | + | [[Category: George AL]] |
- | [[Category: Kim | + | [[Category: Kang C]] |
- | [[Category: Meiler | + | [[Category: Kim H]] |
- | [[Category: Sanders | + | [[Category: Meiler J]] |
- | [[Category: Smith | + | [[Category: Sanders CR]] |
- | [[Category: Sonnichsen | + | [[Category: Smith JA]] |
- | [[Category: Tian | + | [[Category: Sonnichsen FD]] |
- | [[Category: Vanoye | + | [[Category: Tian C]] |
- | + | [[Category: Vanoye CG]] | |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + |
Current revision
NMR structure of human KCNE1 in LMPG micelles at pH 6.0 and 40 degree C
|
Categories: Homo sapiens | Large Structures | George AL | Kang C | Kim H | Meiler J | Sanders CR | Smith JA | Sonnichsen FD | Tian C | Vanoye CG