2h57

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==Crystal structure of human ADP-ribosylation factor-like 6==
==Crystal structure of human ADP-ribosylation factor-like 6==
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<StructureSection load='2h57' size='340' side='right' caption='[[2h57]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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<StructureSection load='2h57' size='340' side='right'caption='[[2h57]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2h57]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H57 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2H57 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2h57]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H57 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2H57 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ARL6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2h57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h57 OCA], [http://pdbe.org/2h57 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2h57 RCSB], [http://www.ebi.ac.uk/pdbsum/2h57 PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2h57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h57 OCA], [https://pdbe.org/2h57 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2h57 RCSB], [https://www.ebi.ac.uk/pdbsum/2h57 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2h57 ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
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[[http://www.uniprot.org/uniprot/ARL6_HUMAN ARL6_HUMAN]] Defects in ARL6 are a cause of Bardet-Biedl syndrome type 3 (BBS3) [MIM:[http://omim.org/entry/209900 209900]]. Bardet-Biedl syndrome (BBS) is a genetically heterogeneous disorder characterized by usually severe pigmentary retinopathy, early onset obesity, polydactyly, hypogenitalism, renal malformation and mental retardation. Secondary features include diabetes mellitus, hypertension and congenital heart disease.<ref>PMID:15258860</ref> <ref>PMID:15314642</ref> Defects in ARL6 are the cause of retinitis pigmentosa type 55 (RP55) [MIM:[http://omim.org/entry/613575 613575]]. RP55 is a retinal dystrophy belonging to the group of pigmentary retinopathies. Retinitis pigmentosa is characterized by retinal pigment deposits visible on fundus examination and primary loss of rod photoreceptor cells followed by secondary loss of cone photoreceptors. Patients typically have night vision blindness and loss of midperipheral visual field. As their condition progresses, they lose their far peripheral visual field and eventually central vision as well.<ref>PMID:19956407</ref>
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[https://www.uniprot.org/uniprot/ARL6_HUMAN ARL6_HUMAN] Defects in ARL6 are a cause of Bardet-Biedl syndrome type 3 (BBS3) [MIM:[https://omim.org/entry/209900 209900]. Bardet-Biedl syndrome (BBS) is a genetically heterogeneous disorder characterized by usually severe pigmentary retinopathy, early onset obesity, polydactyly, hypogenitalism, renal malformation and mental retardation. Secondary features include diabetes mellitus, hypertension and congenital heart disease.<ref>PMID:15258860</ref> <ref>PMID:15314642</ref> Defects in ARL6 are the cause of retinitis pigmentosa type 55 (RP55) [MIM:[https://omim.org/entry/613575 613575]. RP55 is a retinal dystrophy belonging to the group of pigmentary retinopathies. Retinitis pigmentosa is characterized by retinal pigment deposits visible on fundus examination and primary loss of rod photoreceptor cells followed by secondary loss of cone photoreceptors. Patients typically have night vision blindness and loss of midperipheral visual field. As their condition progresses, they lose their far peripheral visual field and eventually central vision as well.<ref>PMID:19956407</ref>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/ARL6_HUMAN ARL6_HUMAN]] Involved in membrane protein trafficking at the base of the ciliary organelle. Mediates recruitment onto plasma membrane of the BBSome complex which would constitute a coat complex required for sorting of specific membrane proteins to the primary cilia. May regulate cilia assembly and disassembly and subsequent ciliary signaling events such as the Wnt signaling cascade. Isoform 2 may be required for proper retinal function and organization.<ref>PMID:20603001</ref> <ref>PMID:20207729</ref>
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[https://www.uniprot.org/uniprot/ARL6_HUMAN ARL6_HUMAN] Involved in membrane protein trafficking at the base of the ciliary organelle. Mediates recruitment onto plasma membrane of the BBSome complex which would constitute a coat complex required for sorting of specific membrane proteins to the primary cilia. May regulate cilia assembly and disassembly and subsequent ciliary signaling events such as the Wnt signaling cascade. Isoform 2 may be required for proper retinal function and organization.<ref>PMID:20603001</ref> <ref>PMID:20207729</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/2h57_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/2h57_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2h57 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
== References ==
== References ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
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[[Category: Arrowsmith, C H]]
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[[Category: Large Structures]]
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[[Category: Bochkarev, A]]
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[[Category: Arrowsmith CH]]
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[[Category: Edwards, A M]]
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[[Category: Bochkarev A]]
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[[Category: Landry, R]]
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[[Category: Edwards AM]]
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[[Category: Lew, J]]
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[[Category: Landry R]]
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[[Category: Park, H]]
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[[Category: Lew J]]
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[[Category: Structural genomic]]
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[[Category: Park H]]
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[[Category: Shen, Y]]
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[[Category: Shen Y]]
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[[Category: Sundstrom, M]]
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[[Category: Sundstrom M]]
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[[Category: Tempel, W]]
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[[Category: Tempel W]]
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[[Category: Wang, J]]
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[[Category: Wang J]]
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[[Category: Weigelt, J]]
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[[Category: Weigelt J]]
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[[Category: Gtp]]
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[[Category: Gtpase]]
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[[Category: Membrane trafficking]]
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[[Category: Sgc]]
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[[Category: Transport protein]]
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Current revision

Crystal structure of human ADP-ribosylation factor-like 6

PDB ID 2h57

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