2o9x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:16, 28 December 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure Of A Putative Redox Enzyme Maturation Protein From Archaeoglobus Fulgidus==
==Crystal Structure Of A Putative Redox Enzyme Maturation Protein From Archaeoglobus Fulgidus==
-
<StructureSection load='2o9x' size='340' side='right' caption='[[2o9x]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
+
<StructureSection load='2o9x' size='340' side='right'caption='[[2o9x]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2o9x]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arcfl Arcfl]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1ze0 1ze0]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O9X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2O9X FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2o9x]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1ze0 1ze0]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O9X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O9X FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.4&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AF0173 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 ARCFL])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o9x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o9x OCA], [http://pdbe.org/2o9x PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2o9x RCSB], [http://www.ebi.ac.uk/pdbsum/2o9x PDBsum], [http://www.topsan.org/Proteins/MCSG/2o9x TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o9x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o9x OCA], [https://pdbe.org/2o9x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o9x RCSB], [https://www.ebi.ac.uk/pdbsum/2o9x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o9x ProSAT], [https://www.topsan.org/Proteins/MCSG/2o9x TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O30064_ARCFU O30064_ARCFU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o9/2o9x_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o9/2o9x_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o9x ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 30: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Arcfl]]
+
[[Category: Archaeoglobus fulgidus]]
-
[[Category: Chruszcz, M]]
+
[[Category: Large Structures]]
-
[[Category: Cymborowski, M]]
+
[[Category: Chruszcz M]]
-
[[Category: Edwards, A]]
+
[[Category: Cymborowski M]]
-
[[Category: Gorodichtchenskaia, E]]
+
[[Category: Edwards A]]
-
[[Category: Kirillova, O]]
+
[[Category: Gorodichtchenskaia E]]
-
[[Category: Structural genomic]]
+
[[Category: Kirillova O]]
-
[[Category: Minor, W]]
+
[[Category: Minor W]]
-
[[Category: Savchenko, A]]
+
[[Category: Savchenko A]]
-
[[Category: Shumilin, I]]
+
[[Category: Shumilin I]]
-
[[Category: Skarina, T]]
+
[[Category: Skarina T]]
-
[[Category: Helical protein]]
+
-
[[Category: Mcsg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Ramp]]
+
-
[[Category: Sad]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal Structure Of A Putative Redox Enzyme Maturation Protein From Archaeoglobus Fulgidus

PDB ID 2o9x

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2o9x"
Personal tools