1y7h
From Proteopedia
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==Structural and biochemical studies identify tobacco SABP2 as a methylsalicylate esterase and further implicate it in plant innate immunity, Northeast Structural Genomics Target AR2241== | ==Structural and biochemical studies identify tobacco SABP2 as a methylsalicylate esterase and further implicate it in plant innate immunity, Northeast Structural Genomics Target AR2241== | ||
- | <StructureSection load='1y7h' size='340' side='right' caption='[[1y7h]], [[Resolution|resolution]] 2.52Å' scene=''> | + | <StructureSection load='1y7h' size='340' side='right'caption='[[1y7h]], [[Resolution|resolution]] 2.52Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1y7h]] is a 8 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1y7h]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Nicotiana_tabacum Nicotiana tabacum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y7H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y7H FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.52Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y7h OCA], [https://pdbe.org/1y7h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y7h RCSB], [https://www.ebi.ac.uk/pdbsum/1y7h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y7h ProSAT], [https://www.topsan.org/Proteins/NESGC/1y7h TOPSAN]</span></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
- | == Function == | ||
- | [[http://www.uniprot.org/uniprot/SABP2_TOBAC SABP2_TOBAC]] Required to convert methyl salicylate (MeSA) to salicylic acid (SA) as part of the signal transduction pathways that activate systemic acquired resistance in systemic tissue. MeSA is believed to be an inactive form that needs to be demethylated to exert a biological effect. Also able to catalyze the conversion of acibenzolar-S-methyl into acibenzolar to induce systemic acquired resistance.<ref>PMID:14673096</ref> <ref>PMID:15668381</ref> <ref>PMID:17916738</ref> <ref>PMID:19131332</ref> <ref>PMID:20621100</ref> <ref>PMID:20797615</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y7/1y7h_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y7/1y7h_consurf.spt"</scriptWhenChecked> |
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y7h ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: Acton | + | [[Category: Nicotiana tabacum]] |
- | [[Category: Chen | + | [[Category: Acton TB]] |
- | [[Category: Chiang | + | [[Category: Chen Y]] |
- | [[Category: Forouhar | + | [[Category: Chiang Y]] |
- | [[Category: Fridman | + | [[Category: Forouhar F]] |
- | [[Category: Klessig | + | [[Category: Fridman E]] |
- | [[Category: Kumar | + | [[Category: Klessig DF]] |
- | [[Category: Montelione | + | [[Category: Kumar D]] |
- | + | [[Category: Montelione GT]] | |
- | [[Category: Park | + | [[Category: Park SW]] |
- | [[Category: Pichersky | + | [[Category: Pichersky E]] |
- | [[Category: Tong | + | [[Category: Tong L]] |
- | [[Category: Yang | + | [[Category: Yang Y]] |
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Current revision
Structural and biochemical studies identify tobacco SABP2 as a methylsalicylate esterase and further implicate it in plant innate immunity, Northeast Structural Genomics Target AR2241
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Categories: Large Structures | Nicotiana tabacum | Acton TB | Chen Y | Chiang Y | Forouhar F | Fridman E | Klessig DF | Kumar D | Montelione GT | Park SW | Pichersky E | Tong L | Yang Y