2kdc

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==NMR Solution Structure of E. coli diacylglycerol kinase (DAGK) in DPC micelles==
==NMR Solution Structure of E. coli diacylglycerol kinase (DAGK) in DPC micelles==
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<StructureSection load='2kdc' size='340' side='right' caption='[[2kdc]], [[NMR_Ensembles_of_Models | 16 NMR models]]' scene=''>
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<StructureSection load='2kdc' size='340' side='right'caption='[[2kdc]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2kdc]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KDC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KDC FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2kdc]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KDC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KDC FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dgkA, b4042, JW4002 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Diacylglycerol_kinase Diacylglycerol kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.107 2.7.1.107] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kdc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kdc OCA], [https://pdbe.org/2kdc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kdc RCSB], [https://www.ebi.ac.uk/pdbsum/2kdc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kdc ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kdc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kdc OCA], [http://pdbe.org/2kdc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kdc RCSB], [http://www.ebi.ac.uk/pdbsum/2kdc PDBsum]</span></td></tr>
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</table>
</table>
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{{Large structure}}
 
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/KDGL_ECOLI KDGL_ECOLI]] Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
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[https://www.uniprot.org/uniprot/KDGL_ECOLI KDGL_ECOLI] Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kd/2kdc_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kd/2kdc_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kdc ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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==See Also==
==See Also==
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*[[Diacylglycerol kinase|Diacylglycerol kinase]]
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*[[Diacylglycerol kinase 3D structures|Diacylglycerol kinase 3D structures]]
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*[[NMR Ensembles of Models|NMR Ensembles of Models]]
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*[[Quality assessment for molecular models|Quality assessment for molecular models]]
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== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Diacylglycerol kinase]]
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[[Category: Escherichia coli K-12]]
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[[Category: Ecoli]]
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[[Category: Large Structures]]
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[[Category: Ellis, C D]]
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[[Category: Ellis CD]]
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[[Category: Hadziselimovic, A]]
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[[Category: Hadziselimovic A]]
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[[Category: Horn, W D.Van]]
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[[Category: Karra MD]]
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[[Category: Karra, M D]]
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[[Category: Kim H]]
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[[Category: Kim, H]]
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[[Category: Sanders CR]]
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[[Category: Sanders, C R]]
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[[Category: Sonnichsen FD]]
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[[Category: Sonnichsen, F D]]
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[[Category: Sulistijo ES]]
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[[Category: Sulistijo, E S]]
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[[Category: Tian C]]
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[[Category: Tian, C]]
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[[Category: Van Horn WD]]
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[[Category: Cell inner membrane]]
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[[Category: Cell membrane]]
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[[Category: Dagk]]
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[[Category: Kinase]]
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[[Category: Membrane]]
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[[Category: Membrane protein]]
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[[Category: Phospholipid biosynthesis]]
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[[Category: Transferase]]
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[[Category: Transmembrane]]
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Current revision

NMR Solution Structure of E. coli diacylglycerol kinase (DAGK) in DPC micelles

PDB ID 2kdc

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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