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| | ==Crystal Structure of the Scorpion Toxin BmBKTtx1== | | ==Crystal Structure of the Scorpion Toxin BmBKTtx1== |
| - | <StructureSection load='1r1g' size='340' side='right' caption='[[1r1g]], [[Resolution|resolution]] 1.72Å' scene=''> | + | <StructureSection load='1r1g' size='340' side='right'caption='[[1r1g]], [[Resolution|resolution]] 1.72Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[1r1g]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R1G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1R1G FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[1r1g]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mesobuthus_martensii Mesobuthus martensii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R1G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1R1G FirstGlance]. <br> |
| - | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=LAL:N,N-DIMETHYL-L-ALANINE'>LAL</scene>, <scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.72Å</td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1q2k|1q2k]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LAL:N,N-DIMETHYL-L-ALANINE'>LAL</scene>, <scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1r1g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1r1g OCA], [http://pdbe.org/1r1g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1r1g RCSB], [http://www.ebi.ac.uk/pdbsum/1r1g PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1r1g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1r1g OCA], [https://pdbe.org/1r1g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1r1g RCSB], [https://www.ebi.ac.uk/pdbsum/1r1g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1r1g ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[http://www.uniprot.org/uniprot/KA191_MESMA KA191_MESMA]] Selective inhibitor of high conductance calcium-activated potassium channels KCa1.1/KCNMA1. May be insect specific.<ref>PMID:15178692</ref> [PDB:3E8Y] | + | [https://www.uniprot.org/uniprot/KA191_OLIMR KA191_OLIMR] Selective inhibitor of high conductance calcium-activated potassium channels KCa1.1/KCNMA1. May be insect specific.<ref>PMID:15178692</ref> [REFERENCE:1] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | ==See Also== | | ==See Also== |
| - | *[[Potassium channel toxin|Potassium channel toxin]] | + | *[[Potassium channel toxin 3D structures|Potassium channel toxin 3D structures]] |
| | == References == | | == References == |
| | <references/> | | <references/> |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Lu, W]] | + | [[Category: Large Structures]] |
| - | [[Category: Lubkowski, J]] | + | [[Category: Mesobuthus martensii]] |
| - | [[Category: Szyk, A]] | + | [[Category: Lu W]] |
| - | [[Category: Xu, C]] | + | [[Category: Lubkowski J]] |
| - | [[Category: Bmbkttx1]] | + | [[Category: Szyk A]] |
| - | [[Category: Reductive dimethylation]] | + | [[Category: Xu C]] |
| - | [[Category: Scorpion toxin]]
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| - | [[Category: Siras from s atom]]
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| - | [[Category: Toxin]]
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| Structural highlights
Function
KA191_OLIMR Selective inhibitor of high conductance calcium-activated potassium channels KCa1.1/KCNMA1. May be insect specific.[1] [REFERENCE:1]
Publication Abstract from PubMed
This report describes the crystal structure of the K(+) channel-blocking toxin, BmBKTx1, isolated recently from the venom of the scorpion Buthus martensi Karsch. This is only the second structure of the short-chain K(+) channel-blocking toxin from scorpion solved by means of X-ray crystallography. Additionally, reductive dimethylation of folded BmBKTx1 employed to induce its crystallization and solution of the structure based on the anomalous signal from the sulfur atoms make this example quite unique. The monomer of BmBKTx1 is formed by 31 amino acid residues, including 6 cysteines connected in 3 disulfide bridges. Crystals of this toxin belong to the space group P2(1) with two molecules present in the asymmetric unit. The unit cell parameters are a = 21.40 A, b=39.70 A, c=29.37 A, and beta-94.13 grades. Based on the high-quality dataset (anomalous signal) collected to the resolution 1.72A using the conventional X-radiation generator (lambda Cu, K alpha = 1.5478 A), the positions of sulfur atoms contributed by 12 cysteine residues have been identified, and subsequent improvement of the experimental phases have allowed structure solution. The final model was refined to the crystallographic R-factor of 0.166. The methyl groups on several lysine residues could be easily modeled into the electron density.
Structure of the scorpion toxin BmBKTtx1 solved from single wavelength anomalous scattering of sulfur.,Szyk A, Lu W, Xu C, Lubkowski J J Struct Biol. 2004 Mar;145(3):289-94. PMID:14960379[2]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Xu CQ, Brone B, Wicher D, Bozkurt O, Lu WY, Huys I, Han YH, Tytgat J, Van Kerkhove E, Chi CW. BmBKTx1, a novel Ca2+-activated K+ channel blocker purified from the Asian scorpion Buthus martensi Karsch. J Biol Chem. 2004 Aug 13;279(33):34562-9. Epub 2004 Jun 3. PMID:15178692 doi:http://dx.doi.org/10.1074/jbc.M312798200
- ↑ Szyk A, Lu W, Xu C, Lubkowski J. Structure of the scorpion toxin BmBKTtx1 solved from single wavelength anomalous scattering of sulfur. J Struct Biol. 2004 Mar;145(3):289-94. PMID:14960379 doi:http://dx.doi.org/10.1016/j.jsb.2003.11.012
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