2bv8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:56, 13 December 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
==THE CRYSTAL STRUCTURE OF PHYCOCYANIN FROM GRACILARIA CHILENSIS.==
+
 
-
<StructureSection load='2bv8' size='340' side='right' caption='[[2bv8]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
+
==The crystal structure of Phycocyanin from Gracilaria chilensis.==
 +
<StructureSection load='2bv8' size='340' side='right'caption='[[2bv8]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2bv8]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Gracilaria_chilensis Gracilaria chilensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BV8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BV8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2bv8]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Agarophyton_chilense Agarophyton chilense]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BV8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BV8 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene>, <scene name='pdbligand=PEB:PHYCOERYTHROBILIN'>PEB</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene>, <scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene>, <scene name='pdbligand=PEB:PHYCOERYTHROBILIN'>PEB</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bv8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bv8 OCA], [http://pdbe.org/2bv8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bv8 RCSB], [http://www.ebi.ac.uk/pdbsum/2bv8 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bv8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bv8 OCA], [https://pdbe.org/2bv8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bv8 RCSB], [https://www.ebi.ac.uk/pdbsum/2bv8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bv8 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6B8L6_GRATL Q6B8L6_GRATL]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bv/2bv8_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bv/2bv8_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bv8 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 26: Line 29:
</div>
</div>
<div class="pdbe-citations 2bv8" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 2bv8" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Phycocyanin|Phycocyanin]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Gracilaria chilensis]]
+
[[Category: Agarophyton chilense]]
-
[[Category: Bruna, C]]
+
[[Category: Large Structures]]
-
[[Category: Bunster, M]]
+
[[Category: Bruna C]]
-
[[Category: Contreras-Martel, C]]
+
[[Category: Bunster M]]
-
[[Category: Martinez-Oyanedel, J]]
+
[[Category: Contreras-Martel C]]
-
[[Category: Poo-Caama, G]]
+
[[Category: Martinez-Oyanedel J]]
-
[[Category: Chloroplast]]
+
[[Category: Poo-Caama G]]
-
[[Category: Light harvesting]]
+
-
[[Category: Photosynthesis]]
+
-
[[Category: Phycobiliprotein]]
+
-
[[Category: Phycobilisome]]
+
-
[[Category: Phycocyanin]]
+
-
[[Category: Phycocyanobilin]]
+

Current revision

The crystal structure of Phycocyanin from Gracilaria chilensis.

PDB ID 2bv8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools