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1qz1

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==Crystal Structure of the Ig 1-2-3 fragment of NCAM==
==Crystal Structure of the Ig 1-2-3 fragment of NCAM==
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<StructureSection load='1qz1' size='340' side='right' caption='[[1qz1]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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<StructureSection load='1qz1' size='340' side='right'caption='[[1qz1]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1qz1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QZ1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1QZ1 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1qz1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QZ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QZ1 FirstGlance]. <br>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ncm|2ncm]], [[3ncm|3ncm]], [[1epf|1epf]]</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NCAM1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qz1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qz1 OCA], [https://pdbe.org/1qz1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qz1 RCSB], [https://www.ebi.ac.uk/pdbsum/1qz1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qz1 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qz1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qz1 OCA], [http://pdbe.org/1qz1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1qz1 RCSB], [http://www.ebi.ac.uk/pdbsum/1qz1 PDBsum]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/NCAM1_RAT NCAM1_RAT]] This protein is a cell adhesion molecule involved in neuron-neuron adhesion, neurite fasciculation, outgrowth of neurites, etc.
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[https://www.uniprot.org/uniprot/NCAM1_RAT NCAM1_RAT] This protein is a cell adhesion molecule involved in neuron-neuron adhesion, neurite fasciculation, outgrowth of neurites, etc.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qz/1qz1_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qz/1qz1_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qz1 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Buffalo rat]]
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[[Category: Large Structures]]
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[[Category: Berezin, V]]
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[[Category: Rattus norvegicus]]
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[[Category: Bock, E]]
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[[Category: Berezin V]]
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[[Category: Breed, J]]
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[[Category: Bock E]]
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[[Category: Diederichs, K]]
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[[Category: Breed J]]
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[[Category: Kasper, C]]
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[[Category: Diederichs K]]
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[[Category: Kastrup, J S]]
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[[Category: Kasper C]]
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[[Category: Kiselyov, V V]]
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[[Category: Kastrup JS]]
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[[Category: Kolkova, K]]
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[[Category: Kiselyov VV]]
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[[Category: Larsen, I K]]
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[[Category: Kolkova K]]
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[[Category: Poulsen, F M]]
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[[Category: Larsen IK]]
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[[Category: Soroka, V]]
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[[Category: Poulsen FM]]
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[[Category: Welte, W]]
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[[Category: Soroka V]]
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[[Category: Cell adhesion]]
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[[Category: Welte W]]
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[[Category: Ig module]]
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[[Category: Ncam]]
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Current revision

Crystal Structure of the Ig 1-2-3 fragment of NCAM

PDB ID 1qz1

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