This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2kcr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:43, 14 June 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Solution structure of anntoxin==
==Solution structure of anntoxin==
-
<StructureSection load='2kcr' size='340' side='right' caption='[[2kcr]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''>
+
<StructureSection load='2kcr' size='340' side='right'caption='[[2kcr]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2kcr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Assam_treefrog Assam treefrog]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KCR FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2kcr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Hyla_annectans Hyla annectans]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KCR FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kcr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kcr OCA], [http://pdbe.org/2kcr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kcr RCSB], [http://www.ebi.ac.uk/pdbsum/2kcr PDBsum]</span></td></tr>
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kcr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kcr OCA], [https://pdbe.org/2kcr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kcr RCSB], [https://www.ebi.ac.uk/pdbsum/2kcr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kcr ProSAT]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 9: Line 10:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kc/2kcr_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kc/2kcr_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kcr ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Assam treefrog]]
+
[[Category: Hyla annectans]]
-
[[Category: Hong, J]]
+
[[Category: Large Structures]]
-
[[Category: Lai, R]]
+
[[Category: Hong J]]
-
[[Category: Lin, D]]
+
[[Category: Lai R]]
-
[[Category: You, D]]
+
[[Category: Lin D]]
-
[[Category: Protein]]
+
[[Category: You D]]
-
[[Category: Toxin]]
+

Current revision

Solution structure of anntoxin

PDB ID 2kcr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools