2c7u
From Proteopedia
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- | == | + | |
- | <StructureSection load='2c7u' size='340' side='right' caption='[[2c7u]], [[Resolution|resolution]] 2.38Å' scene=''> | + | ==Conflicting selective forces affect CD8 T-cell receptor contact sites in an HLA-A2 immunodominant HIV epitope.== |
+ | <StructureSection load='2c7u' size='340' side='right'caption='[[2c7u]], [[Resolution|resolution]] 2.38Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2c7u]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2c7u]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C7U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2C7U FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.38Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2c7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c7u OCA], [https://pdbe.org/2c7u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2c7u RCSB], [https://www.ebi.ac.uk/pdbsum/2c7u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2c7u ProSAT]</span></td></tr> |
</table> | </table> | ||
- | == Function == | ||
- | [[http://www.uniprot.org/uniprot/1A02_HUMAN 1A02_HUMAN]] Involved in the presentation of foreign antigens to the immune system. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c7/2c7u_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c7/2c7u_consurf.spt"</scriptWhenChecked> |
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2c7u ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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==See Also== | ==See Also== | ||
- | *[[Beta-2 microglobulin|Beta-2 microglobulin]] | + | *[[Beta-2 microglobulin 3D structures|Beta-2 microglobulin 3D structures]] |
- | *[[ | + | *[[MHC 3D structures|MHC 3D structures]] |
+ | *[[MHC I 3D structures|MHC I 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Human]] | + | [[Category: Homo sapiens]] |
- | [[Category: Armitage | + | [[Category: Human immunodeficiency virus 1]] |
- | [[Category: Beattie | + | [[Category: Large Structures]] |
- | [[Category: Buus | + | [[Category: Armitage AE]] |
- | [[Category: Chotiyarnwong | + | [[Category: Beattie T]] |
- | [[Category: Christie | + | [[Category: Buus S]] |
- | [[Category: Dong | + | [[Category: Chotiyarnwong P]] |
- | [[Category: Fugger | + | [[Category: Christie N]] |
- | [[Category: Iversen | + | [[Category: Dong T]] |
- | [[Category: Jones | + | [[Category: Fugger JL]] |
- | [[Category: Kaul | + | [[Category: Iversen AK]] |
- | [[Category: Klarlund-Pedersen | + | [[Category: Jones EY]] |
- | [[Category: Learn | + | [[Category: Kaul R]] |
- | [[Category: Lee | + | [[Category: Klarlund-Pedersen B]] |
- | [[Category: Li | + | [[Category: Learn GH]] |
- | [[Category: Luscher | + | [[Category: Lee JK]] |
- | [[Category: | + | [[Category: Li Y]] |
- | [[Category: | + | [[Category: Luscher MA]] |
- | + | [[Category: MacDonald K]] | |
- | [[Category: Mullins | + | [[Category: McMichael AJ]] |
- | [[Category: Skinhoj | + | [[Category: Mullins JI]] |
- | [[Category: Stewart-Jones | + | [[Category: Skinhoj P]] |
- | [[Category: Sylvester-Hviid | + | [[Category: Stewart-Jones G]] |
- | [[Category: Ullum | + | [[Category: Sylvester-Hviid C]] |
- | [[Category: Xu | + | [[Category: Ullum H]] |
- | [[Category: | + | [[Category: Xu X]] |
- | + | [[Category: Van der Merwe PA]] | |
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Current revision
Conflicting selective forces affect CD8 T-cell receptor contact sites in an HLA-A2 immunodominant HIV epitope.
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Categories: Homo sapiens | Human immunodeficiency virus 1 | Large Structures | Armitage AE | Beattie T | Buus S | Chotiyarnwong P | Christie N | Dong T | Fugger JL | Iversen AK | Jones EY | Kaul R | Klarlund-Pedersen B | Learn GH | Lee JK | Li Y | Luscher MA | MacDonald K | McMichael AJ | Mullins JI | Skinhoj P | Stewart-Jones G | Sylvester-Hviid C | Ullum H | Xu X | Van der Merwe PA