This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2f82

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:22, 30 August 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==HMG-CoA synthase from Brassica juncea in the apo-form==
==HMG-CoA synthase from Brassica juncea in the apo-form==
-
<StructureSection load='2f82' size='340' side='right' caption='[[2f82]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+
<StructureSection load='2f82' size='340' side='right'caption='[[2f82]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2f82]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Braju Braju]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F82 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2F82 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2f82]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Brassica_juncea Brassica juncea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F82 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F82 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2f9a|2f9a]], [[2fa3|2fa3]], [[2fa0|2fa0]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2f82 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f82 OCA], [http://pdbe.org/2f82 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2f82 RCSB], [http://www.ebi.ac.uk/pdbsum/2f82 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f82 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f82 OCA], [https://pdbe.org/2f82 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f82 RCSB], [https://www.ebi.ac.uk/pdbsum/2f82 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f82 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9M6U3_BRAJU Q9M6U3_BRAJU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f8/2f82_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f8/2f82_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f82 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 29: Line 32:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Braju]]
+
[[Category: Brassica juncea]]
-
[[Category: Ferrer, J L]]
+
[[Category: Large Structures]]
-
[[Category: Noel, J P]]
+
[[Category: Ferrer JL]]
-
[[Category: Pojer, F]]
+
[[Category: Noel JP]]
-
[[Category: Richard, S B]]
+
[[Category: Pojer F]]
-
[[Category: Hmgs1]]
+
[[Category: Richard SB]]
-
[[Category: Transferase]]
+

Current revision

HMG-CoA synthase from Brassica juncea in the apo-form

PDB ID 2f82

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools