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1yn9

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==Crystal structure of baculovirus RNA 5'-phosphatase complexed with phosphate==
==Crystal structure of baculovirus RNA 5'-phosphatase complexed with phosphate==
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<StructureSection load='1yn9' size='340' side='right' caption='[[1yn9]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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<StructureSection load='1yn9' size='340' side='right'caption='[[1yn9]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1yn9]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Acmnpv Acmnpv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YN9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YN9 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1yn9]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Autographa_californica_nucleopolyhedrovirus Autographa californica nucleopolyhedrovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YN9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YN9 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PTP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=46015 AcMNPV])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydrolase Hydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.33 3.1.3.33] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yn9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yn9 OCA], [https://pdbe.org/1yn9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yn9 RCSB], [https://www.ebi.ac.uk/pdbsum/1yn9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yn9 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yn9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yn9 OCA], [http://pdbe.org/1yn9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yn9 RCSB], [http://www.ebi.ac.uk/pdbsum/1yn9 PDBsum]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/PTP_NPVAC PTP_NPVAC]] Also dephosphorylates seryl and threonyl residues.
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[https://www.uniprot.org/uniprot/PTP_NPVAC PTP_NPVAC] Also dephosphorylates seryl and threonyl residues.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yn/1yn9_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yn/1yn9_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yn9 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Acmnpv]]
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[[Category: Autographa californica nucleopolyhedrovirus]]
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[[Category: Hydrolase]]
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[[Category: Large Structures]]
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[[Category: Changela, A]]
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[[Category: Changela A]]
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[[Category: Martins, A]]
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[[Category: Martins A]]
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[[Category: Mondragon, A]]
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[[Category: Mondragon A]]
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[[Category: Shuman, S]]
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[[Category: Shuman S]]
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[[Category: Cysteine phosphatase]]
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[[Category: P-loop]]
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[[Category: Rna triphosphatase]]
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Current revision

Crystal structure of baculovirus RNA 5'-phosphatase complexed with phosphate

PDB ID 1yn9

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