This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2cb2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:25, 22 May 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
==SULFUR OXYGENASE REDUCTASE FROM ACIDIANUS AMBIVALENS==
+
 
-
<StructureSection load='2cb2' size='340' side='right' caption='[[2cb2]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+
==Sulfur Oxygenase Reductase from Acidianus Ambivalens==
 +
<StructureSection load='2cb2' size='340' side='right'caption='[[2cb2]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2cb2]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Aciam Aciam]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CB2 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2cb2]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Acidianus_ambivalens Acidianus ambivalens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CB2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CB2 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSS:S-MERCAPTOCYSTEINE'>CSS</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSS:S-MERCAPTOCYSTEINE'>CSS</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cb2 OCA], [http://pdbe.org/2cb2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cb2 RCSB], [http://www.ebi.ac.uk/pdbsum/2cb2 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cb2 OCA], [https://pdbe.org/2cb2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cb2 RCSB], [https://www.ebi.ac.uk/pdbsum/2cb2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cb2 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SOR_ACIAM SOR_ACIAM] Catalyzes the simultaneous oxidation and reduction of elemental sulfur in the presence of oxygen, with sulfite and hydrogen sulfide as products.<ref>PMID:15030315</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cb/2cb2_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cb/2cb2_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cb2 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 30: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Aciam]]
+
[[Category: Acidianus ambivalens]]
-
[[Category: Frazao, C]]
+
[[Category: Large Structures]]
-
[[Category: Gomes, C M]]
+
[[Category: Frazao C]]
-
[[Category: Kletzin, A]]
+
[[Category: Gomes CM]]
-
[[Category: Urich, T]]
+
[[Category: Kletzin A]]
-
[[Category: 2-his-1- carboxylate facial triad]]
+
[[Category: Urich T]]
-
[[Category: Acidophilic]]
+
-
[[Category: Archaea]]
+
-
[[Category: Biogeochemical sulfur cycle]]
+
-
[[Category: Compartmentalization]]
+
-
[[Category: Cysteine persulphide]]
+
-
[[Category: Extremophile]]
+
-
[[Category: Icosatetramer]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Mononuclear non-heme iron]]
+
-
[[Category: Nano-structure]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Proto- organelle]]
+
-
[[Category: Sulfur oxygenase reductase]]
+
-
[[Category: Thermophilic]]
+

Current revision

Sulfur Oxygenase Reductase from Acidianus Ambivalens

PDB ID 2cb2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2cb2"
Personal tools