2cyg
From Proteopedia
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==Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome== | ==Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome== | ||
- | <StructureSection load='2cyg' size='340' side='right' caption='[[2cyg]], [[Resolution|resolution]] 1.45Å' scene=''> | + | <StructureSection load='2cyg' size='340' side='right'caption='[[2cyg]], [[Resolution|resolution]] 1.45Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2cyg]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2cyg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Musa_acuminata Musa acuminata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CYG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CYG FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cyg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cyg OCA], [https://pdbe.org/2cyg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cyg RCSB], [https://www.ebi.ac.uk/pdbsum/2cyg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cyg ProSAT]</span></td></tr> |
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/E13C_MUSAC E13C_MUSAC] Possesses beta-1,3-endoglucanase activity in vitro (PubMed:10672030). May play a role in fruit pulp softening process (Probable). Can cleave beta-1,6-branched glucans in vitro (PubMed:16421930).<ref>PMID:10672030</ref> <ref>PMID:16421930</ref> <ref>PMID:10672030</ref> <ref>PMID:20467747</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cy/2cyg_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cy/2cyg_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cyg ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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==See Also== | ==See Also== | ||
- | *[[Glucanase|Glucanase]] | + | *[[Glucanase 3D structures|Glucanase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Large Structures]] |
[[Category: Musa acuminata]] | [[Category: Musa acuminata]] | ||
- | [[Category: Barre | + | [[Category: Barre A]] |
- | [[Category: Czjzek | + | [[Category: Czjzek M]] |
- | + | [[Category: Peumans WJ]] | |
- | [[Category: Peumans | + | [[Category: Receveur-Brechot V]] |
- | [[Category: Receveur-Brechot | + | [[Category: Rouge P]] |
- | [[Category: Rouge | + | [[Category: Roussel A]] |
- | [[Category: Roussel | + | [[Category: Van Damme EJM]] |
- | [[Category: | + | |
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Current revision
Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome
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