2dtn
From Proteopedia
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==Crystal structure of Helicobacter pylori undecaprenyl pyrophosphate synthase complexed with pyrophosphate== | ==Crystal structure of Helicobacter pylori undecaprenyl pyrophosphate synthase complexed with pyrophosphate== | ||
| - | <StructureSection load='2dtn' size='340' side='right' caption='[[2dtn]], [[Resolution|resolution]] 2.50Å' scene=''> | + | <StructureSection load='2dtn' size='340' side='right'caption='[[2dtn]], [[Resolution|resolution]] 2.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2dtn]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2dtn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DTN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DTN FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DPO:DIPHOSPHATE'>DPO</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dtn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dtn OCA], [https://pdbe.org/2dtn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dtn RCSB], [https://www.ebi.ac.uk/pdbsum/2dtn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dtn ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/ISPT_HELPY ISPT_HELPY] Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dt/2dtn_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dt/2dtn_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dtn ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Atcc 43504]] | ||
| - | [[Category: Chen, C L]] | ||
| - | [[Category: Guo, R T]] | ||
| - | [[Category: Ko, T P]] | ||
| - | [[Category: Kuo, C J]] | ||
| - | [[Category: Liang, P H]] | ||
| - | [[Category: Wang, A H.J]] | ||
| - | [[Category: Cis prenyltransferase]] | ||
[[Category: Helicobacter pylori]] | [[Category: Helicobacter pylori]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| + | [[Category: Chen CL]] | ||
| + | [[Category: Guo RT]] | ||
| + | [[Category: Ko TP]] | ||
| + | [[Category: Kuo CJ]] | ||
| + | [[Category: Liang PH]] | ||
| + | [[Category: Wang AH-J]] | ||
Current revision
Crystal structure of Helicobacter pylori undecaprenyl pyrophosphate synthase complexed with pyrophosphate
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Categories: Helicobacter pylori | Large Structures | Chen CL | Guo RT | Ko TP | Kuo CJ | Liang PH | Wang AH-J
