1un8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:03, 9 May 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
==CRYSTAL STRUCTURE OF THE DIHYDROXYACETONE KINASE OF C. FREUNDII (NATIVE FORM)==
+
 
-
<StructureSection load='1un8' size='340' side='right' caption='[[1un8]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+
==Crystal structure of the dihydroxyacetone kinase of C. freundii (native form)==
 +
<StructureSection load='1un8' size='340' side='right'caption='[[1un8]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1un8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacterium_freundii"_braak_1928 "bacterium freundii" braak 1928]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UN8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UN8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1un8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Citrobacter_freundii Citrobacter freundii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UN8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UN8 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MYY:(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL+PALMITATE'>MYY</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1un9|1un9]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MYY:(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL+PALMITATE'>MYY</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glycerone_kinase Glycerone kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.29 2.7.1.29] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1un8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1un8 OCA], [https://pdbe.org/1un8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1un8 RCSB], [https://www.ebi.ac.uk/pdbsum/1un8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1un8 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1un8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1un8 OCA], [http://pdbe.org/1un8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1un8 RCSB], [http://www.ebi.ac.uk/pdbsum/1un8 PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/DHAK_CITFR DHAK_CITFR]] Catalyzes the phosphorylation of dihydroxyacetone.
+
[https://www.uniprot.org/uniprot/DHAK_CITFR DHAK_CITFR] Catalyzes the phosphorylation of dihydroxyacetone.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/un/1un8_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/un/1un8_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1un8 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 33: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacterium freundii braak 1928]]
+
[[Category: Citrobacter freundii]]
-
[[Category: Glycerone kinase]]
+
[[Category: Large Structures]]
-
[[Category: Arnold, I]]
+
[[Category: Arnold I]]
-
[[Category: Baumann, U]]
+
[[Category: Baumann U]]
-
[[Category: Erni, B]]
+
[[Category: Erni B]]
-
[[Category: Garcia-Alles, L F]]
+
[[Category: Garcia-Alles LF]]
-
[[Category: Siebold, C]]
+
[[Category: Siebold C]]
-
[[Category: Transferase]]
+

Current revision

Crystal structure of the dihydroxyacetone kinase of C. freundii (native form)

PDB ID 1un8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1un8"
Personal tools