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1wmy

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==Crystal Structure of C-type Lectin CEL-I from Cucumaria echinata==
==Crystal Structure of C-type Lectin CEL-I from Cucumaria echinata==
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<StructureSection load='1wmy' size='340' side='right' caption='[[1wmy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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<StructureSection load='1wmy' size='340' side='right'caption='[[1wmy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1wmy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Cucumaria_echinata Cucumaria echinata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WMY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WMY FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1wmy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cucumaria_echinata Cucumaria echinata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WMY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WMY FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1bch|1bch]], [[1bcj|1bcj]], [[1byf|1byf]], [[1tlg|1tlg]], [[1wmz|1wmz]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wmy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wmy OCA], [http://pdbe.org/1wmy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wmy RCSB], [http://www.ebi.ac.uk/pdbsum/1wmy PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wmy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wmy OCA], [https://pdbe.org/1wmy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wmy RCSB], [https://www.ebi.ac.uk/pdbsum/1wmy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wmy ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q7M462_CUCEC Q7M462_CUCEC]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wm/1wmy_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wm/1wmy_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wmy ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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</StructureSection>
</StructureSection>
[[Category: Cucumaria echinata]]
[[Category: Cucumaria echinata]]
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[[Category: Aoyagi, H]]
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[[Category: Large Structures]]
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[[Category: Fujimoto, T]]
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[[Category: Aoyagi H]]
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[[Category: Hatakeyama, T]]
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[[Category: Fujimoto T]]
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[[Category: Kurisu, G]]
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[[Category: Hatakeyama T]]
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[[Category: Kusunoki, M]]
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[[Category: Kurisu G]]
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[[Category: Sugawara, H]]
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[[Category: Kusunoki M]]
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[[Category: C-type lectin]]
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[[Category: Sugawara H]]
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[[Category: Invertebrate]]
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[[Category: N-acetylgalactosamine]]
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[[Category: Sugar binding protein]]
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Current revision

Crystal Structure of C-type Lectin CEL-I from Cucumaria echinata

PDB ID 1wmy

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