1wwp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:35, 30 October 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of ttk003001694 from Thermus Thermophilus HB8==
==Crystal structure of ttk003001694 from Thermus Thermophilus HB8==
-
<StructureSection load='1wwp' size='340' side='right' caption='[[1wwp]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
+
<StructureSection load='1wwp' size='340' side='right'caption='[[1wwp]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1wwp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WWP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WWP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1wwp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WWP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WWP FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.11&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wwp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wwp OCA], [http://pdbe.org/1wwp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wwp RCSB], [http://www.ebi.ac.uk/pdbsum/1wwp PDBsum], [http://www.topsan.org/Proteins/RSGI/1wwp TOPSAN]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wwp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wwp OCA], [https://pdbe.org/1wwp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wwp RCSB], [https://www.ebi.ac.uk/pdbsum/1wwp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wwp ProSAT], [https://www.topsan.org/Proteins/RSGI/1wwp TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5SKK7_THET8 Q5SKK7_THET8]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ww/1wwp_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ww/1wwp_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wwp ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Thet8]]
+
[[Category: Large Structures]]
-
[[Category: Kuramitsu, S]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Murayama, K]]
+
[[Category: Kuramitsu S]]
-
[[Category: Structural genomic]]
+
[[Category: Murayama K]]
-
[[Category: Shirouzu, M]]
+
[[Category: Shirouzu M]]
-
[[Category: Terada, T]]
+
[[Category: Terada T]]
-
[[Category: Wang, H]]
+
[[Category: Wang H]]
-
[[Category: Yokoyama, S]]
+
[[Category: Yokoyama S]]
-
[[Category: Rsgi]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of ttk003001694 from Thermus Thermophilus HB8

PDB ID 1wwp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools