This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2nwt
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==NMR Structure of Protein UPF0165 protein AF_2212 from Archaeoglobus Fulgidus; Northeast Structural Genomics Consortium Target GR83== | ==NMR Structure of Protein UPF0165 protein AF_2212 from Archaeoglobus Fulgidus; Northeast Structural Genomics Consortium Target GR83== | ||
| - | <StructureSection load='2nwt' size='340' side='right' caption='[[2nwt | + | <StructureSection load='2nwt' size='340' side='right'caption='[[2nwt]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2nwt]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2nwt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NWT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NWT FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nwt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nwt OCA], [https://pdbe.org/2nwt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nwt RCSB], [https://www.ebi.ac.uk/pdbsum/2nwt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nwt ProSAT], [https://www.topsan.org/Proteins/NESGC/2nwt TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/VPB21_ARCFU VPB21_ARCFU] Possibly the antitoxin component of a toxin-antitoxin (TA) module. Its cognate toxin is VapC21 (Potential). |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nw/2nwt_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nw/2nwt_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nwt ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Archaeoglobus fulgidus]] |
| - | [[Category: Acton | + | [[Category: Large Structures]] |
| - | [[Category: Atreya | + | [[Category: Acton TB]] |
| - | [[Category: Chen | + | [[Category: Atreya HS]] |
| - | [[Category: Cunningham | + | [[Category: Chen CX]] |
| - | [[Category: Eletsky | + | [[Category: Cunningham K]] |
| - | [[Category: Jiang | + | [[Category: Eletsky A]] |
| - | [[Category: Liu | + | [[Category: Jiang M]] |
| - | [[Category: Montelione | + | [[Category: Liu G]] |
| - | + | [[Category: Montelione GT]] | |
| - | [[Category: Parish | + | [[Category: Parish D]] |
| - | [[Category: Rost | + | [[Category: Rost B]] |
| - | [[Category: Singarapu | + | [[Category: Singarapu KK]] |
| - | [[Category: Sukumaran | + | [[Category: Sukumaran DK]] |
| - | [[Category: Swapna | + | [[Category: Swapna GVT]] |
| - | [[Category: Szyperski | + | [[Category: Szyperski T]] |
| - | [[Category: Xiao | + | [[Category: Xiao R]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
NMR Structure of Protein UPF0165 protein AF_2212 from Archaeoglobus Fulgidus; Northeast Structural Genomics Consortium Target GR83
| |||||||||||
Categories: Archaeoglobus fulgidus | Large Structures | Acton TB | Atreya HS | Chen CX | Cunningham K | Eletsky A | Jiang M | Liu G | Montelione GT | Parish D | Rost B | Singarapu KK | Sukumaran DK | Swapna GVT | Szyperski T | Xiao R
