1o79

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:57, 9 May 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
==Structures of human oxidosqualene cyclase inhibitors bound to a homolgous enzyme==
+
 
-
<StructureSection load='1o79' size='340' side='right' caption='[[1o79]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+
==Structures of human oxidosqualene cyclase inhibitors bound to an homologous enzyme==
 +
<StructureSection load='1o79' size='340' side='right'caption='[[1o79]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1o79]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_27009 Atcc 27009]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O79 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1O79 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1o79]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Alicyclobacillus_acidocaldarius Alicyclobacillus acidocaldarius]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O79 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1O79 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene>, <scene name='pdbligand=R23:METHYL-[4-(4-PIPERIDINE-1-YLMETHYL-PHENYL)-CYCLOHEXYL]-CARBAMINIC+ACID-(4-CHLOROPHENYL)-ESTER'>R23</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1gsz|1gsz]], [[1h35|1h35]], [[1h36|1h36]], [[1h37|1h37]], [[1h39|1h39]], [[1h3a|1h3a]], [[1h3b|1h3b]], [[1h3c|1h3c]], [[1o6h|1o6h]], [[1o6q|1o6q]], [[1o6r|1o6r]], [[1sqc|1sqc]], [[1ump|1ump]], [[2sqc|2sqc]], [[3sqc|3sqc]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene>, <scene name='pdbligand=R23:METHYL-[4-(4-PIPERIDINE-1-YLMETHYL-PHENYL)-CYCLOHEXYL]-CARBAMINIC+ACID-(4-CHLOROPHENYL)-ESTER'>R23</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Squalene--hopene_cyclase Squalene--hopene cyclase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.99.17 5.4.99.17] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1o79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1o79 OCA], [https://pdbe.org/1o79 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1o79 RCSB], [https://www.ebi.ac.uk/pdbsum/1o79 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1o79 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1o79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1o79 OCA], [http://pdbe.org/1o79 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1o79 RCSB], [http://www.ebi.ac.uk/pdbsum/1o79 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SQHC_ALIAD SQHC_ALIAD] Catalyzes the cyclization of squalene into hopene.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o7/1o79_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o7/1o79_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1o79 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 34: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 27009]]
+
[[Category: Alicyclobacillus acidocaldarius]]
-
[[Category: Squalene--hopene cyclase]]
+
[[Category: Large Structures]]
-
[[Category: Aebi, J D]]
+
[[Category: Aebi JD]]
-
[[Category: Dehmlow, H]]
+
[[Category: Dehmlow H]]
-
[[Category: Lenhart, A]]
+
[[Category: Lenhart A]]
-
[[Category: Morand, O H]]
+
[[Category: Morand OH]]
-
[[Category: Reinert, D J]]
+
[[Category: Reinert DJ]]
-
[[Category: Schulz, G E]]
+
[[Category: Schulz GE]]
-
[[Category: Weihofen, W A]]
+
[[Category: Weihofen WA]]
-
[[Category: Cholesterol biosynthesis]]
+
-
[[Category: Inhibitor]]
+
-
[[Category: Isomerase]]
+
-
[[Category: Monotopic membrane protein]]
+

Current revision

Structures of human oxidosqualene cyclase inhibitors bound to an homologous enzyme

PDB ID 1o79

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools