1ys9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:59, 14 February 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ys9.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of phosphatase SPy1043 from Streptococcus pyogenes==
-
|PDB= 1ys9 |SIZE=350|CAPTION= <scene name='initialview01'>1ys9</scene>, resolution 2.56&Aring;
+
<StructureSection load='1ys9' size='340' side='right'caption='[[1ys9]], [[Resolution|resolution]] 2.56&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[1ys9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_M1_GAS Streptococcus pyogenes M1 GAS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YS9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YS9 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.56&#8491;</td></tr>
-
|GENE=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ys9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ys9 OCA], [https://pdbe.org/1ys9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ys9 RCSB], [https://www.ebi.ac.uk/pdbsum/1ys9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ys9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1ys9 TOPSAN]</span></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0647 NagD]</span>
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ys9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ys9 OCA], [http://www.ebi.ac.uk/pdbsum/1ys9 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1ys9 RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q99ZW4_STRP1 Q99ZW4_STRP1]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal sructure of phosphatase SPy1043 from Streptococcus pyogenes'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ys/1ys9_consurf.spt"</scriptWhenChecked>
-
1YS9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes Streptococcus pyogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YS9 OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Streptococcus pyogenes]]
+
</jmolCheckbox>
-
[[Category: Almo, S C.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ys9 ConSurf].
-
[[Category: Burley, S K.]]
+
<div style="clear:both"></div>
-
[[Category: Fedorov, A A.]]
+
__TOC__
-
[[Category: Fedorov, E V.]]
+
</StructureSection>
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Large Structures]]
-
[[Category: new york structural genomix research consortium]]
+
[[Category: Streptococcus pyogenes M1 GAS]]
-
[[Category: nysgrc]]
+
[[Category: Almo SC]]
-
[[Category: nysgxrc target t2098]]
+
[[Category: Burley SK]]
-
[[Category: protein structure initiative]]
+
[[Category: Fedorov AA]]
-
[[Category: psi]]
+
[[Category: Fedorov EV]]
-
[[Category: structural genomic]]
+
-
[[Category: unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:15:53 2008''
+

Current revision

Crystal structure of phosphatase SPy1043 from Streptococcus pyogenes

PDB ID 1ys9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools