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1ysp

From Proteopedia

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[[Image:1ysp.gif|left|200px]]
 
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{{Structure
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==Crystal structure of the C-terminal domain of E. coli transcriptional regulator KdgR.==
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|PDB= 1ysp |SIZE=350|CAPTION= <scene name='initialview01'>1ysp</scene>, resolution 1.80&Aring;
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<StructureSection load='1ysp' size='340' side='right'caption='[[1ysp]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
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<table><tr><td colspan='2'>[[1ysp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YSP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YSP FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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|GENE= kdgR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01614 IclR]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ysp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ysp OCA], [https://pdbe.org/1ysp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ysp RCSB], [https://www.ebi.ac.uk/pdbsum/1ysp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ysp ProSAT], [https://www.topsan.org/Proteins/MCSG/1ysp TOPSAN]</span></td></tr>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ysp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ysp OCA], [http://www.ebi.ac.uk/pdbsum/1ysp PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1ysp RCSB]</span>
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</table>
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}}
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== Function ==
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[https://www.uniprot.org/uniprot/KDGR_ECOLI KDGR_ECOLI] Transcriptional regulator of the kdgK gene for the kdg kinase and the kdgT gene for the kdg permease.
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'''Crystal structure of the C-terminal domain of E. coli transcriptional regulator KdgR.'''
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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==About this Structure==
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<jmolCheckbox>
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1YSP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YSP OCA].
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ys/1ysp_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ysp ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Bochkarev, A.]]
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[[Category: Bochkarev A]]
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[[Category: Borek, D.]]
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[[Category: Borek D]]
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[[Category: Evdokimova, E.]]
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[[Category: Evdokimova E]]
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[[Category: Ezersky, A.]]
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[[Category: Ezersky A]]
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[[Category: Lunin, V V.]]
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[[Category: Joachimiak A]]
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[[Category: MCSG, Midwest Center for Structural Genomics.]]
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[[Category: Lunin VV]]
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[[Category: Savchenko, A.]]
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[[Category: Savchenko A]]
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[[Category: Skarina, T.]]
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[[Category: Skarina T]]
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[[Category: Xu, X.]]
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[[Category: Xu X]]
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[[Category: iclr]]
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[[Category: kdgr]]
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[[Category: mcsg]]
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[[Category: midwest center for structural genomic]]
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[[Category: protein structure initiative]]
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[[Category: psi]]
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[[Category: structural genomic]]
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[[Category: transcriptional regulator]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:15:56 2008''
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Current revision

Crystal structure of the C-terminal domain of E. coli transcriptional regulator KdgR.

PDB ID 1ysp

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