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2kdz

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==Structure of the R2R3 DNA binding domain of MYB1 protein from protozoan parasite trichomonas vaginalis in complex with MRE-1/MRE-2R DNA==
==Structure of the R2R3 DNA binding domain of MYB1 protein from protozoan parasite trichomonas vaginalis in complex with MRE-1/MRE-2R DNA==
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<StructureSection load='2kdz' size='340' side='right' caption='[[2kdz]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''>
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<StructureSection load='2kdz' size='340' side='right'caption='[[2kdz]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2kdz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Triva Triva]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KDZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KDZ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2kdz]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichomonas_vaginalis Trichomonas vaginalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KDZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KDZ FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kdz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kdz OCA], [http://pdbe.org/2kdz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kdz RCSB], [http://www.ebi.ac.uk/pdbsum/2kdz PDBsum]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kdz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kdz OCA], [https://pdbe.org/2kdz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kdz RCSB], [https://www.ebi.ac.uk/pdbsum/2kdz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kdz ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q58HP2_TRIVA Q58HP2_TRIVA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kd/2kdz_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kd/2kdz_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kdz ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Triva]]
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[[Category: Large Structures]]
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[[Category: Chen, C]]
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[[Category: Trichomonas vaginalis]]
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[[Category: Chou, C C]]
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[[Category: Chen C]]
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[[Category: Hsu, H M]]
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[[Category: Chou CC]]
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[[Category: Lou, Y C]]
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[[Category: Hsu HM]]
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[[Category: Rajasekaran, M]]
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[[Category: Lou YC]]
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[[Category: Tai, J H]]
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[[Category: Rajasekaran M]]
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[[Category: Wei, S Y]]
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[[Category: Tai JH]]
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[[Category: Dna-binding]]
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[[Category: Wei SY]]
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[[Category: Myb1]]
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[[Category: Nucleus]]
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[[Category: R2r3 domain]]
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[[Category: Transcription-dna complex]]
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Current revision

Structure of the R2R3 DNA binding domain of MYB1 protein from protozoan parasite trichomonas vaginalis in complex with MRE-1/MRE-2R DNA

PDB ID 2kdz

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