2bbe

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:16, 14 February 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2bbe.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of protein SO0527 from Shewanella oneidensis==
-
|PDB= 2bbe |SIZE=350|CAPTION= <scene name='initialview01'>2bbe</scene>, resolution 1.97&Aring;
+
<StructureSection load='2bbe' size='340' side='right'caption='[[2bbe]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
+
<table><tr><td colspan='2'>[[2bbe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_oneidensis_MR-1 Shewanella oneidensis MR-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BBE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BBE FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1359 COG1359]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bbe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bbe OCA], [https://pdbe.org/2bbe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bbe RCSB], [https://www.ebi.ac.uk/pdbsum/2bbe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bbe ProSAT], [https://www.topsan.org/Proteins/MCSG/2bbe TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bbe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bbe OCA], [http://www.ebi.ac.uk/pdbsum/2bbe PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2bbe RCSB]</span>
+
</table>
-
}}
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q8EJE0_SHEON Q8EJE0_SHEON]
-
'''Crystal structure of protein SO0527 from Shewanella oneidensis'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2BBE is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BBE OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bb/2bbe_consurf.spt"</scriptWhenChecked>
-
[[Category: Bacteria]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Bigelow, L J.]]
+
</jmolCheckbox>
-
[[Category: Chang, C.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bbe ConSurf].
-
[[Category: Joachimiak, A.]]
+
<div style="clear:both"></div>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
__TOC__
-
[[Category: mcsg]]
+
</StructureSection>
-
[[Category: midwest center for structural genomic]]
+
[[Category: Large Structures]]
-
[[Category: protein structure initiative]]
+
[[Category: Shewanella oneidensis MR-1]]
-
[[Category: psi]]
+
[[Category: Bigelow L]]
-
[[Category: so0527]]
+
[[Category: Chang C]]
-
[[Category: structural genomic]]
+
[[Category: Joachimiak A]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:22:14 2008''
+

Current revision

Crystal structure of protein SO0527 from Shewanella oneidensis

PDB ID 2bbe

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools