2f9f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:55, 21 November 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2f9f.gif|left|200px]]
 
-
{{Structure
+
==Crystal Structure of the Putative Mannosyl Transferase (wbaZ-1)from Archaeoglobus fulgidus, Northeast Structural Genomics Target GR29A.==
-
|PDB= 2f9f |SIZE=350|CAPTION= <scene name='initialview01'>2f9f</scene>, resolution 1.80&Aring;
+
<StructureSection load='2f9f' size='340' side='right'caption='[[2f9f]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2f9f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F9F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F9F FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
|GENE= wbaZ-1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224325 Archaeoglobus fulgidus DSM 4304])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00534 Glycos_transf_1]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f9f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f9f OCA], [https://pdbe.org/2f9f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f9f RCSB], [https://www.ebi.ac.uk/pdbsum/2f9f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f9f ProSAT], [https://www.topsan.org/Proteins/NESGC/2f9f TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2f9f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f9f OCA], [http://www.ebi.ac.uk/pdbsum/2f9f PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2f9f RCSB]</span>
+
</table>
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''Crystal Structure of the Putative Mannosyl Transferase (wbaZ-1)from Archaeoglobus fulgidus, Northeast Structural Genomics Target GR29A.'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f9/2f9f_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
2F9F is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_dsm_4304 Archaeoglobus fulgidus dsm 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F9F OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Archaeoglobus fulgidus dsm 4304]]
+
</jmolCheckbox>
-
[[Category: Single protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f9f ConSurf].
-
[[Category: Acton, T B.]]
+
<div style="clear:both"></div>
-
[[Category: Conover, K.]]
+
__TOC__
-
[[Category: Forouhar, F.]]
+
</StructureSection>
-
[[Category: Hunt, J F.]]
+
[[Category: Archaeoglobus fulgidus DSM 4304]]
-
[[Category: Montelione, G T.]]
+
[[Category: Large Structures]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Acton TB]]
-
[[Category: Tong, L.]]
+
[[Category: Conover K]]
-
[[Category: Xiao, R.]]
+
[[Category: Forouhar F]]
-
[[Category: Zhou, W.]]
+
[[Category: Hunt JF]]
-
[[Category: alpha-beta protein]]
+
[[Category: Montelione GT]]
-
[[Category: nesg]]
+
[[Category: Tong L]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Xiao R]]
-
[[Category: protein structure initiative]]
+
[[Category: Zhou W]]
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:23:57 2008''
+

Current revision

Crystal Structure of the Putative Mannosyl Transferase (wbaZ-1)from Archaeoglobus fulgidus, Northeast Structural Genomics Target GR29A.

PDB ID 2f9f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools