2fq4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:13, 17 October 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2fq4.gif|left|200px]]
 
-
{{Structure
+
==The crystal structure of the transcriptional regulator (TetR family) from Bacillus cereus==
-
|PDB= 2fq4 |SIZE=350|CAPTION= <scene name='initialview01'>2fq4</scene>, resolution 1.79&Aring;
+
<StructureSection load='2fq4' size='340' side='right'caption='[[2fq4]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2fq4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_14579 Bacillus cereus ATCC 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FQ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FQ4 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
-
|GENE= GI:29896827 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226900 Bacillus cereus ATCC 14579])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00440 TetR_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1309 AcrR]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fq4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fq4 OCA], [https://pdbe.org/2fq4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fq4 RCSB], [https://www.ebi.ac.uk/pdbsum/2fq4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fq4 ProSAT], [https://www.topsan.org/Proteins/MCSG/2fq4 TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fq4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fq4 OCA], [http://www.ebi.ac.uk/pdbsum/2fq4 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2fq4 RCSB]</span>
+
</table>
-
}}
+
== Function ==
 +
[https://www.uniprot.org/uniprot/Q81BJ4_BACCR Q81BJ4_BACCR]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fq/2fq4_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fq4 ConSurf].
 +
<div style="clear:both"></div>
-
'''The crystal structure of the transcriptional regulator (TetR family) from Bacillus cereus'''
+
==See Also==
-
 
+
*[[Tetracycline repressor protein 3D structures|Tetracycline repressor protein 3D structures]]
-
 
+
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
-
==About this Structure==
+
__TOC__
-
2FQ4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus_atcc_14579 Bacillus cereus atcc 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FQ4 OCA].
+
</StructureSection>
-
[[Category: Bacillus cereus atcc 14579]]
+
[[Category: Bacillus cereus ATCC 14579]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Cymborowski, M.]]
+
[[Category: Cymborowski M]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Joachimiak A]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Minor W]]
-
[[Category: Minor, W.]]
+
[[Category: Moy S]]
-
[[Category: Moy, S.]]
+
[[Category: Wu R]]
-
[[Category: Wu, R.]]
+
[[Category: Zhang R]]
-
[[Category: Zhang, R.]]
+
-
[[Category: bacillus cereus]]
+
-
[[Category: dna-binding protein]]
+
-
[[Category: mcsg]]
+
-
[[Category: midwest center for structural genomic]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
[[Category: transcriptional regulator,tetr]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:25:17 2008''
+

Current revision

The crystal structure of the transcriptional regulator (TetR family) from Bacillus cereus

PDB ID 2fq4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools