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2iuw
From Proteopedia
(Difference between revisions)
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| - | == | + | |
| - | <StructureSection load='2iuw' size='340' side='right' caption='[[2iuw]], [[Resolution|resolution]] 1.50Å' scene=''> | + | ==Crystal structure of human ABH3 in complex with iron ion and 2- oxoglutarate== |
| + | <StructureSection load='2iuw' size='340' side='right'caption='[[2iuw]], [[Resolution|resolution]] 1.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2iuw]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2iuw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IUW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IUW FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr> |
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=LED:(4R)-5-OXO-L-LEUCINE'>LED</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=LED:(4R)-5-OXO-L-LEUCINE'>LED</scene></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iuw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iuw OCA], [https://pdbe.org/2iuw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iuw RCSB], [https://www.ebi.ac.uk/pdbsum/2iuw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iuw ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iu/2iuw_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iu/2iuw_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2iuw ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Human]] | [[Category: Human]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Aas, P A]] | [[Category: Aas, P A]] | ||
[[Category: Bjoras, M]] | [[Category: Bjoras, M]] | ||
| - | [[Category: Desousa, M M.L]] | ||
[[Category: Drablos, F]] | [[Category: Drablos, F]] | ||
[[Category: Krokan, H E]] | [[Category: Krokan, H E]] | ||
| Line 41: | Line 42: | ||
[[Category: Talstad, V]] | [[Category: Talstad, V]] | ||
[[Category: Vagbo, C B]] | [[Category: Vagbo, C B]] | ||
| + | [[Category: DeSousa, M M.L]] | ||
[[Category: Beta jellyroll]] | [[Category: Beta jellyroll]] | ||
[[Category: Demethylase]] | [[Category: Demethylase]] | ||
[[Category: Dna/rna repair]] | [[Category: Dna/rna repair]] | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
Current revision
Crystal structure of human ABH3 in complex with iron ion and 2- oxoglutarate
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