2oaa
From Proteopedia
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==Restriction endonuclease MvaI-cognate DNA substrate complex== | ==Restriction endonuclease MvaI-cognate DNA substrate complex== | ||
- | <StructureSection load='2oaa' size='340' side='right' caption='[[2oaa]], [[Resolution|resolution]] 1.50Å' scene=''> | + | <StructureSection load='2oaa' size='340' side='right'caption='[[2oaa]], [[Resolution|resolution]] 1.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2oaa]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2oaa]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Kocuria_varians Kocuria varians]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OAA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OAA FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oaa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oaa OCA], [https://pdbe.org/2oaa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oaa RCSB], [https://www.ebi.ac.uk/pdbsum/2oaa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oaa ProSAT]</span></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q8RNV5_KOCVA Q8RNV5_KOCVA] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oa/2oaa_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oa/2oaa_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oaa ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Kocuria varians]] |
- | [[Category: Bochtler | + | [[Category: Large Structures]] |
- | [[Category: Czapinska | + | [[Category: Bochtler M]] |
- | [[Category: Kaus-Drobek | + | [[Category: Czapinska H]] |
- | [[Category: Siksnys | + | [[Category: Kaus-Drobek M]] |
- | [[Category: Sokolowska | + | [[Category: Siksnys V]] |
- | [[Category: Szczepanowski | + | [[Category: Sokolowska M]] |
- | [[Category: Tamulaitis | + | [[Category: Szczepanowski RH]] |
- | [[Category: Urbanke | + | [[Category: Tamulaitis G]] |
- | + | [[Category: Urbanke K]] | |
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Current revision
Restriction endonuclease MvaI-cognate DNA substrate complex
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