2g9d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:02, 30 October 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2g9d.gif|left|200px]]
 
-
{{Structure
+
==Crystal Structure of Succinylglutamate desuccinylase from Vibrio cholerae, Northeast Structural Genomics Target VcR20==
-
|PDB= 2g9d |SIZE=350|CAPTION= <scene name='initialview01'>2g9d</scene>, resolution 3.00&Aring;
+
<StructureSection load='2g9d' size='340' side='right'caption='[[2g9d]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2g9d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_MO10 Vibrio cholerae MO10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G9D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G9D FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2988 COG2988]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g9d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g9d OCA], [https://pdbe.org/2g9d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g9d RCSB], [https://www.ebi.ac.uk/pdbsum/2g9d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g9d ProSAT], [https://www.topsan.org/Proteins/NESGC/2g9d TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g9d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g9d OCA], [http://www.ebi.ac.uk/pdbsum/2g9d PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2g9d RCSB]</span>
+
</table>
-
}}
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/ASTE_VIBCH ASTE_VIBCH] Transforms N(2)-succinylglutamate into succinate and glutamate (By similarity).
-
'''Crystal Structure of Succinylglutamate desuccinylase from Vibrio cholerae, Northeast Structural Genomics Target VcR20'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2G9D is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G9D OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g9/2g9d_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Vibrio cholerae]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Acton, T B.]]
+
</jmolCheckbox>
-
[[Category: Conover, K.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g9d ConSurf].
-
[[Category: Forouhar, F.]]
+
<div style="clear:both"></div>
-
[[Category: Hunt, J F.]]
+
__TOC__
-
[[Category: Jayaraman, S.]]
+
</StructureSection>
-
[[Category: Montelione, G T.]]
+
[[Category: Large Structures]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Vibrio cholerae MO10]]
-
[[Category: Rong, X.]]
+
[[Category: Acton TB]]
-
[[Category: Tong, L.]]
+
[[Category: Conover K]]
-
[[Category: Zhou, W.]]
+
[[Category: Forouhar F]]
-
[[Category: alpha-beta protein]]
+
[[Category: Hunt JF]]
-
[[Category: nesg]]
+
[[Category: Jayaraman S]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Montelione GT]]
-
[[Category: protein structure initiative]]
+
[[Category: Rong X]]
-
[[Category: psi]]
+
[[Category: Tong L]]
-
[[Category: structural genomic]]
+
[[Category: Zhou W]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:26:22 2008''
+

Current revision

Crystal Structure of Succinylglutamate desuccinylase from Vibrio cholerae, Northeast Structural Genomics Target VcR20

PDB ID 2g9d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2g9d"
Personal tools