2gax

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:13, 17 October 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2gax.gif|left|200px]]
 
-
{{Structure
+
==Structure of Protein of Unknown Function Atu0240 from Agrobacteriium tumerfaciencs str. C58==
-
|PDB= 2gax |SIZE=350|CAPTION= <scene name='initialview01'>2gax</scene>, resolution 1.801&Aring;
+
<StructureSection load='2gax' size='340' side='right'caption='[[2gax]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
+
<table><tr><td colspan='2'>[[2gax]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GAX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GAX FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.801&#8491;</td></tr>
-
|GENE= atu0240 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=358 Agrobacterium tumefaciens])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4954 COG4954]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gax OCA], [https://pdbe.org/2gax PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gax RCSB], [https://www.ebi.ac.uk/pdbsum/2gax PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gax ProSAT], [https://www.topsan.org/Proteins/MCSG/2gax TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gax OCA], [http://www.ebi.ac.uk/pdbsum/2gax PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2gax RCSB]</span>
+
</table>
-
}}
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/A9CKI6_AGRFC A9CKI6_AGRFC]
-
'''Structure of Protein of Unknown Function Atu0240 from Agrobacteriium tumerfaciencs str. C58'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2GAX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GAX OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ga/2gax_consurf.spt"</scriptWhenChecked>
-
[[Category: Agrobacterium tumefaciens]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Binkowski, T A.]]
+
</jmolCheckbox>
-
[[Category: Edwards, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gax ConSurf].
-
[[Category: Evdokimova, E.]]
+
<div style="clear:both"></div>
-
[[Category: Joachimiak, A.]]
+
__TOC__
-
[[Category: Kudritska, M.]]
+
</StructureSection>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Agrobacterium fabrum str. C58]]
-
[[Category: agrobacterium tumfacien]]
+
[[Category: Large Structures]]
-
[[Category: hypothetical protein]]
+
[[Category: Binkowski TA]]
-
[[Category: mcsg]]
+
[[Category: Edwards A]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Evdokimova E]]
-
[[Category: protein structure initiative]]
+
[[Category: Joachimiak A]]
-
[[Category: psi]]
+
[[Category: Kudritska M]]
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:26:27 2008''
+

Current revision

Structure of Protein of Unknown Function Atu0240 from Agrobacteriium tumerfaciencs str. C58

PDB ID 2gax

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools