2gqf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:04, 30 October 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2gqf.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of flavoprotein HI0933 from Haemophilus influenzae Rd==
-
|PDB= 2gqf |SIZE=350|CAPTION= <scene name='initialview01'>2gqf</scene>, resolution 2.70&Aring;
+
<StructureSection load='2gqf' size='340' side='right'caption='[[2gqf]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GQF FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
|GENE= HI0933 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=727 Haemophilus influenzae])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2081 COG2081], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3380 COG3380]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqf OCA], [https://pdbe.org/2gqf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gqf RCSB], [https://www.ebi.ac.uk/pdbsum/2gqf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gqf ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2gqf TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqf OCA], [http://www.ebi.ac.uk/pdbsum/2gqf PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2gqf RCSB]</span>
+
</table>
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''Crystal structure of flavoprotein HI0933 from Haemophilus influenzae Rd'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/2gqf_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
2GQF is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQF OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Haemophilus influenzae]]
+
</jmolCheckbox>
-
[[Category: Single protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gqf ConSurf].
-
[[Category: Almo, S C.]]
+
<div style="clear:both"></div>
-
[[Category: Burley, S K.]]
+
__TOC__
-
[[Category: Keefe, L J.]]
+
</StructureSection>
-
[[Category: Mulichak, A M.]]
+
[[Category: Large Structures]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Almo SC]]
-
[[Category: Patskovsky, Y.]]
+
[[Category: Burley SK]]
-
[[Category: fad-utilizing protein]]
+
[[Category: Keefe LJ]]
-
[[Category: flavoprotein]]
+
[[Category: Mulichak AM]]
-
[[Category: new york structural genomix research consortium]]
+
[[Category: Patskovsky Y]]
-
[[Category: nysgxrc]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:27:20 2008''
+

Current revision

Crystal structure of flavoprotein HI0933 from Haemophilus influenzae Rd

PDB ID 2gqf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools