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2beo

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[[Image:2beo.gif|left|200px]]<br />
 
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<applet load="2beo" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="2beo, resolution 2.70&Aring;" />
 
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'''PRFA, TRANSCRIPTIONAL REGULATOR IN LISTERIA MONOCYTOGENES'''<br />
 
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==Overview==
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==PrfA, Transcriptional Regulator In Listeria Monocytogenes==
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Listeria monocytogenes, a Gram-positive, facultative intracellular human, pathogen, causes systemic infections with high mortality rate. The, majority of the known pathogenicity factors of L. monocytogenes is, regulated by a single transcription factor, PrfA. Hyperhaemolytic, laboratory strains of L. monocytogenes express the constitutively active, mutant PrfA(G145S) inducing virulence gene overexpression independent of, environmental conditions. PrfA belongs to the Crp/Fnr family of, transcription factors generally activated by a small effector, such as, cAMP or O(2). We present the crystal structures of wild-type PrfA, the, first Gram-positive member of the Crp/Fnr family, and of the, constitutively active mutant PrfA(G145S). Cap (Crp) has previously been, described exclusively in the cAMP-induced (DNA-free and -bound), conformation. By contrast, the PrfA structures present views both of the, non-induced state and of the mutationally activated form. The low, DNA-binding affinity of wild-type PrfA is supported both structurally, (partly disordered helix-turn-helix motif, overall geometry of the HTH, alpha-helices deviates from Cap) and by surface plasmon resonance analyses, (K(D) = 0.9 microM). In PrfA(G145S) the HTH motifs dramatically rearrange, to adopt a conformation comparable to cAMP-induced Cap and hence, favourable for DNA binding, supported by a DNA-binding affinity of 50 nM., Finally, the hypothesis that wild-type PrfA, like other Crp/Fnr family, members, may require an as yet unidentified cofactor for activation is, supported by the presence of a distinct tunnel in PrfA, located at the, interface of the beta-barrel and the DNA-binding domain.
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<StructureSection load='2beo' size='340' side='right'caption='[[2beo]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2beo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes_EGD-e Listeria monocytogenes EGD-e]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BEO FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACM:ACETAMIDE'>ACM</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GLN:GLUTAMINE'>GLN</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2beo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2beo OCA], [https://pdbe.org/2beo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2beo RCSB], [https://www.ebi.ac.uk/pdbsum/2beo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2beo ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PRFA_LISMO PRFA_LISMO] Positively regulates expression of listeriolysin, of 1-phosphadidylinositol phosphodiesterase (PI-PLC) and other virulence factors.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/2beo_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2beo ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Listeria monocytogenes, a Gram-positive, facultative intracellular human pathogen, causes systemic infections with high mortality rate. The majority of the known pathogenicity factors of L. monocytogenes is regulated by a single transcription factor, PrfA. Hyperhaemolytic laboratory strains of L. monocytogenes express the constitutively active mutant PrfA(G145S) inducing virulence gene overexpression independent of environmental conditions. PrfA belongs to the Crp/Fnr family of transcription factors generally activated by a small effector, such as cAMP or O(2). We present the crystal structures of wild-type PrfA, the first Gram-positive member of the Crp/Fnr family, and of the constitutively active mutant PrfA(G145S). Cap (Crp) has previously been described exclusively in the cAMP-induced (DNA-free and -bound) conformation. By contrast, the PrfA structures present views both of the non-induced state and of the mutationally activated form. The low DNA-binding affinity of wild-type PrfA is supported both structurally (partly disordered helix-turn-helix motif, overall geometry of the HTH alpha-helices deviates from Cap) and by surface plasmon resonance analyses (K(D) = 0.9 microM). In PrfA(G145S) the HTH motifs dramatically rearrange to adopt a conformation comparable to cAMP-induced Cap and hence favourable for DNA binding, supported by a DNA-binding affinity of 50 nM. Finally, the hypothesis that wild-type PrfA, like other Crp/Fnr family members, may require an as yet unidentified cofactor for activation is supported by the presence of a distinct tunnel in PrfA, located at the interface of the beta-barrel and the DNA-binding domain.
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==About this Structure==
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The mutation G145S in PrfA, a key virulence regulator of Listeria monocytogenes, increases DNA-binding affinity by stabilizing the HTH motif.,Eiting M, Hageluken G, Schubert WD, Heinz DW Mol Microbiol. 2005 Apr;56(2):433-46. PMID:15813735<ref>PMID:15813735</ref>
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2BEO is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes] with CL, GLN, PG4 and ACM as [http://en.wikipedia.org/wiki/ligands ligands]. Structure known Active Site: AC1. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2BEO OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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The mutation G145S in PrfA, a key virulence regulator of Listeria monocytogenes, increases DNA-binding affinity by stabilizing the HTH motif., Eiting M, Hageluken G, Schubert WD, Heinz DW, Mol Microbiol. 2005 Apr;56(2):433-46. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15813735 15813735]
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</div>
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[[Category: Listeria monocytogenes]]
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<div class="pdbe-citations 2beo" style="background-color:#fffaf0;"></div>
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[[Category: Single protein]]
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[[Category: Eiting, M.]]
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[[Category: Hagelueken, G.]]
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[[Category: Heinz, D.W.]]
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[[Category: Schubert, W.D.]]
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[[Category: ACM]]
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[[Category: CL]]
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[[Category: GLN]]
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[[Category: PG4]]
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[[Category: activator]]
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[[Category: bacterial infection]]
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[[Category: human pathogen]]
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[[Category: transcriptional regulator]]
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[[Category: virulence]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 5 14:54:12 2007''
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==See Also==
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*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Listeria monocytogenes EGD-e]]
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[[Category: Eiting M]]
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[[Category: Hagelueken G]]
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[[Category: Heinz DW]]
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[[Category: Schubert W-D]]

Current revision

PrfA, Transcriptional Regulator In Listeria Monocytogenes

PDB ID 2beo

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