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| | ==Structure of the Mg2+-bound synaptotagmin-1 SNARE complex (short unit cell form)== | | ==Structure of the Mg2+-bound synaptotagmin-1 SNARE complex (short unit cell form)== |
| - | <StructureSection load='5cci' size='340' side='right' caption='[[5cci]], [[Resolution|resolution]] 4.10Å' scene=''> | + | <StructureSection load='5cci' size='340' side='right'caption='[[5cci]], [[Resolution|resolution]] 4.10Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[5cci]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CCI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5CCI FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5cci]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CCI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5CCI FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 4.1Å</td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ccg|5ccg]], [[5cch|5cch]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5cci FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cci OCA], [http://pdbe.org/5cci PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5cci RCSB], [http://www.ebi.ac.uk/pdbsum/5cci PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5cci FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cci OCA], [https://pdbe.org/5cci PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5cci RCSB], [https://www.ebi.ac.uk/pdbsum/5cci PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5cci ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[http://www.uniprot.org/uniprot/SNP25_RAT SNP25_RAT]] t-SNARE involved in the molecular regulation of neurotransmitter release. May play an important role in the synaptic function of specific neuronal systems. Associates with proteins involved in vesicle docking and membrane fusion. Regulates plasma membrane recycling through its interaction with CENPF. [[http://www.uniprot.org/uniprot/VAMP2_RAT VAMP2_RAT]] Involved in the targeting and/or fusion of transport vesicles to their target membrane (By similarity). [[http://www.uniprot.org/uniprot/STX1A_RAT STX1A_RAT]] Potentially involved in docking of synaptic vesicles at presynaptic active zones. May play a critical role in neurotransmitter exocytosis. May mediate Ca(2+)-regulation of exocytosis acrosomal reaction in sperm. [[http://www.uniprot.org/uniprot/SYT1_RAT SYT1_RAT]] May have a regulatory role in the membrane interactions during trafficking of synaptic vesicles at the active zone of the synapse. It binds acidic phospholipids with a specificity that requires the presence of both an acidic head group and a diacyl backbone. A Ca(2+)-dependent interaction between synaptotagmin and putative receptors for activated protein kinase C has also been reported. It can bind to at least three additional proteins in a Ca(2+)-independent manner; these are neurexins, syntaxin and AP2. | + | [https://www.uniprot.org/uniprot/VAMP2_RAT VAMP2_RAT] Involved in the targeting and/or fusion of transport vesicles to their target membrane (By similarity). |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | </div> | | </div> |
| | <div class="pdbe-citations 5cci" style="background-color:#fffaf0;"></div> | | <div class="pdbe-citations 5cci" style="background-color:#fffaf0;"></div> |
| | + | |
| | + | ==See Also== |
| | + | *[[Synaptosomal-associated protein|Synaptosomal-associated protein]] |
| | + | *[[Synaptotagmin 3D structures|Synaptotagmin 3D structures]] |
| | + | *[[Syntaxin 3D structures|Syntaxin 3D structures]] |
| | + | *[[Vesicle-associated membrane protein 3D structures|Vesicle-associated membrane protein 3D structures]] |
| | == References == | | == References == |
| | <references/> | | <references/> |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Brunger, A T]] | + | [[Category: Large Structures]] |
| - | [[Category: Lyubimov, A Y]] | + | [[Category: Rattus norvegicus]] |
| - | [[Category: Uervirojnangkoorn, M]] | + | [[Category: Brunger AT]] |
| - | [[Category: Weis, W I]] | + | [[Category: Lyubimov AY]] |
| - | [[Category: Zhao, M]] | + | [[Category: Uervirojnangkoorn M]] |
| - | [[Category: Zhou, Q]] | + | [[Category: Weis WI]] |
| - | [[Category: Endocytosis]] | + | [[Category: Zhao M]] |
| - | [[Category: Exocytosis]] | + | [[Category: Zhou Q]] |
| - | [[Category: Neuronal snare complex]]
| + | |
| - | [[Category: Synaptic fusion complex]]
| + | |
| - | [[Category: Synaptotagmin1]]
| + | |
| Structural highlights
Function
VAMP2_RAT Involved in the targeting and/or fusion of transport vesicles to their target membrane (By similarity).
Publication Abstract from PubMed
Synaptotagmin-1 and neuronal SNARE proteins have central roles in evoked synchronous neurotransmitter release; however, it is unknown how they cooperate to trigger synaptic vesicle fusion. Here we report atomic-resolution crystal structures of Ca2+- and Mg2+-bound complexes between synaptotagmin-1 and the neuronal SNARE complex, one of which was determined with diffraction data from an X-ray free-electron laser, leading to an atomic-resolution structure with accurate rotamer assignments for many side chains. The structures reveal several interfaces, including a large, specific, Ca2+-independent and conserved interface. Tests of this interface by mutagenesis suggest that it is essential for Ca2+-triggered neurotransmitter release in mouse hippocampal neuronal synapses and for Ca2+-triggered vesicle fusion in a reconstituted system. We propose that this interface forms before Ca2+ triggering, moves en bloc as Ca2+ influx promotes the interactions between synaptotagmin-1 and the plasma membrane, and consequently remodels the membrane to promote fusion, possibly in conjunction with other interfaces.
Architecture of the synaptotagmin-SNARE machinery for neuronal exocytosis.,Zhou Q, Lai Y, Bacaj T, Zhao M, Lyubimov AY, Uervirojnangkoorn M, Zeldin OB, Brewster AS, Sauter NK, Cohen AE, Soltis SM, Alonso-Mori R, Chollet M, Lemke HT, Pfuetzner RA, Choi UB, Weis WI, Diao J, Sudhof TC, Brunger AT Nature. 2015 Aug 17. doi: 10.1038/nature14975. PMID:26280336[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Zhou Q, Lai Y, Bacaj T, Zhao M, Lyubimov AY, Uervirojnangkoorn M, Zeldin OB, Brewster AS, Sauter NK, Cohen AE, Soltis SM, Alonso-Mori R, Chollet M, Lemke HT, Pfuetzner RA, Choi UB, Weis WI, Diao J, Sudhof TC, Brunger AT. Architecture of the synaptotagmin-SNARE machinery for neuronal exocytosis. Nature. 2015 Aug 17. doi: 10.1038/nature14975. PMID:26280336 doi:http://dx.doi.org/10.1038/nature14975
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