2id1

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[[Image:2id1.gif|left|200px]]
 
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{{Structure
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==X-Ray Crystal Structure of Protein CV0518 from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR5.==
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|PDB= 2id1 |SIZE=350|CAPTION= <scene name='initialview01'>2id1</scene>, resolution 3.00&Aring;
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<StructureSection load='2id1' size='340' side='right'caption='[[2id1]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
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<table><tr><td colspan='2'>[[2id1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chromobacterium_violaceum_ATCC_12472 Chromobacterium violaceum ATCC 12472]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ID1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ID1 FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
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|GENE= CV_0518 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536 Chromobacterium violaceum])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0799 COG0799]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2id1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2id1 OCA], [https://pdbe.org/2id1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2id1 RCSB], [https://www.ebi.ac.uk/pdbsum/2id1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2id1 ProSAT], [https://www.topsan.org/Proteins/NESGC/2id1 TOPSAN]</span></td></tr>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2id1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2id1 OCA], [http://www.ebi.ac.uk/pdbsum/2id1 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2id1 RCSB]</span>
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</table>
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}}
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== Function ==
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[https://www.uniprot.org/uniprot/IOJAP_CHRVO IOJAP_CHRVO] Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.[HAMAP-Rule:MF_01477]
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'''X-Ray Crystal Structure of Protein CV0518 from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR5.'''
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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==About this Structure==
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<jmolCheckbox>
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2ID1 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ID1 OCA].
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/id/2id1_consurf.spt"</scriptWhenChecked>
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[[Category: Chromobacterium violaceum]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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[[Category: Single protein]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Acton, T B.]]
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</jmolCheckbox>
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[[Category: Baran, M.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2id1 ConSurf].
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[[Category: Cunningham, K.]]
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<div style="clear:both"></div>
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[[Category: Forouhar, F.]]
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__TOC__
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[[Category: Ho, C K.]]
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</StructureSection>
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[[Category: Hunt, J F.]]
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[[Category: Chromobacterium violaceum ATCC 12472]]
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[[Category: Janjua, H.]]
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[[Category: Large Structures]]
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[[Category: Liu, J.]]
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[[Category: Acton TB]]
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[[Category: Ma, L C.]]
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[[Category: Baran M]]
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[[Category: Montelione, G T.]]
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[[Category: Cunningham K]]
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Forouhar F]]
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[[Category: Rost, B.]]
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[[Category: Ho CK]]
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[[Category: Seetharaman, J.]]
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[[Category: Hunt JF]]
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[[Category: Tong, L.]]
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[[Category: Janjua H]]
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[[Category: Xiao, R.]]
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[[Category: Liu J]]
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[[Category: Zhou, W.]]
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[[Category: Ma LC]]
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[[Category: alpha-beta protein]]
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[[Category: Montelione GT]]
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[[Category: nesg]]
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[[Category: Rost B]]
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[[Category: northeast structural genomics consortium]]
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[[Category: Seetharaman J]]
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[[Category: protein structure initiative]]
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[[Category: Tong L]]
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[[Category: psi-2]]
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[[Category: Xiao R]]
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[[Category: structural genomic]]
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[[Category: Zhou W]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:31:46 2008''
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Current revision

X-Ray Crystal Structure of Protein CV0518 from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR5.

PDB ID 2id1

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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