This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2ift
From Proteopedia
(Difference between revisions)
| (11 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2ift.gif|left|200px]] | ||
| - | + | ==Crystal structure of putative methylase HI0767 from Haemophilus influenzae. NESG target IR102.== | |
| - | + | <StructureSection load='2ift' size='340' side='right'caption='[[2ift]], [[Resolution|resolution]] 2.30Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2ift]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IFT FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ift FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ift OCA], [https://pdbe.org/2ift PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ift RCSB], [https://www.ebi.ac.uk/pdbsum/2ift PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ift ProSAT], [https://www.topsan.org/Proteins/NESGC/2ift TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/RSMD_HAEIN RSMD_HAEIN] Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle. | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | == | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/if/2ift_consurf.spt"</scriptWhenChecked> | |
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ift ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Haemophilus influenzae]] | [[Category: Haemophilus influenzae]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Acton | + | [[Category: Acton TB]] |
| - | [[Category: Cunningham | + | [[Category: Cunningham K]] |
| - | [[Category: Hunt | + | [[Category: Hunt JF]] |
| - | [[Category: Janjua | + | [[Category: Janjua H]] |
| - | [[Category: Liu | + | [[Category: Liu J]] |
| - | [[Category: Ma | + | [[Category: Ma LC]] |
| - | [[Category: Montelione | + | [[Category: Montelione GT]] |
| - | + | [[Category: Seetharaman J]] | |
| - | [[Category: Seetharaman | + | [[Category: Shastry R]] |
| - | [[Category: Shastry | + | [[Category: Su M]] |
| - | [[Category: Su | + | [[Category: Tong L]] |
| - | [[Category: Tong | + | [[Category: Vorobiev SM]] |
| - | [[Category: Vorobiev | + | [[Category: Xiao R]] |
| - | [[Category: Xiao | + | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of putative methylase HI0767 from Haemophilus influenzae. NESG target IR102.
| |||||||||||
Categories: Haemophilus influenzae | Large Structures | Acton TB | Cunningham K | Hunt JF | Janjua H | Liu J | Ma LC | Montelione GT | Seetharaman J | Shastry R | Su M | Tong L | Vorobiev SM | Xiao R

