This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2jvm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:06, 29 May 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2jvm.gif|left|200px]]
 
-
{{Structure
+
==Solution NMR structure of Rhodobacter sphaeroides protein RHOS4_26430. Northeast Structural Genomics Consortium target RhR95==
-
|PDB= 2jvm |SIZE=350|CAPTION= <scene name='initialview01'>2jvm</scene>
+
<StructureSection load='2jvm' size='340' side='right'caption='[[2jvm]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2jvm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cereibacter_sphaeroides_2.4.1 Cereibacter sphaeroides 2.4.1]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JVM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JVM FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
|GENE= RSP_1027, RHOS4_26430 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272943 Rhodobacter sphaeroides 2.4.1])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jvm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jvm OCA], [https://pdbe.org/2jvm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jvm RCSB], [https://www.ebi.ac.uk/pdbsum/2jvm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jvm ProSAT], [https://www.topsan.org/Proteins/NESGC/2jvm TOPSAN]</span></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4391 COG4391]</span>
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jvm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jvm OCA], [http://www.ebi.ac.uk/pdbsum/2jvm PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2jvm RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q3IZ23_CERS4 Q3IZ23_CERS4]
-
 
+
== Evolutionary Conservation ==
-
'''Solution NMR structure of Rhodobacter sphaeroides protein RHOS4_26430. Northeast Structural Genomics Consortium target RhR95'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jv/2jvm_consurf.spt"</scriptWhenChecked>
-
2JVM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides_2.4.1 Rhodobacter sphaeroides 2.4.1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JVM OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Rhodobacter sphaeroides 2 4.1]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Acton, T B.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jvm ConSurf].
-
[[Category: Baran, M C.]]
+
<div style="clear:both"></div>
-
[[Category: Eletsky, A.]]
+
__TOC__
-
[[Category: Janjua, H.]]
+
</StructureSection>
-
[[Category: Liu, J.]]
+
[[Category: Cereibacter sphaeroides 2 4.1]]
-
[[Category: Montelione, G T.]]
+
[[Category: Large Structures]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Acton TB]]
-
[[Category: Owens, L.]]
+
[[Category: Baran MC]]
-
[[Category: Parish, D.]]
+
[[Category: Eletsky A]]
-
[[Category: Rost, B.]]
+
[[Category: Janjua H]]
-
[[Category: Sukumaran, D.]]
+
[[Category: Liu J]]
-
[[Category: Swapna, G V.T.]]
+
[[Category: Montelione GT]]
-
[[Category: Szyperski, T.]]
+
[[Category: Owens L]]
-
[[Category: Wang, H.]]
+
[[Category: Parish D]]
-
[[Category: Xiao, R.]]
+
[[Category: Rost B]]
-
[[Category: Xu, D.]]
+
[[Category: Sukumaran D]]
-
[[Category: Zhang, Q.]]
+
[[Category: Swapna GVT]]
-
[[Category: alpha+beta]]
+
[[Category: Szyperski T]]
-
[[Category: nesg]]
+
[[Category: Wang H]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Xiao R]]
-
[[Category: protein structure initiative]]
+
[[Category: Xu D]]
-
[[Category: psi-2]]
+
[[Category: Zhang Q]]
-
[[Category: structural genomic]]
+
-
[[Category: unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:34:12 2008''
+

Current revision

Solution NMR structure of Rhodobacter sphaeroides protein RHOS4_26430. Northeast Structural Genomics Consortium target RhR95

PDB ID 2jvm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2jvm"
Personal tools