5dq6

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(New page: '''Unreleased structure''' The entry 5dq6 is ON HOLD Authors: Mabbitt, P.D., Jackson, C.J. Description: Mus musculus A20 OTU domain Category: Unreleased Structures [[Category: Jack...)
Current revision (21:54, 28 June 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5dq6 is ON HOLD
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==Mus musculus A20 OTU domain==
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<StructureSection load='5dq6' size='340' side='right'caption='[[5dq6]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5dq6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DQ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DQ6 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dq6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dq6 OCA], [https://pdbe.org/5dq6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dq6 RCSB], [https://www.ebi.ac.uk/pdbsum/5dq6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dq6 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TNAP3_MOUSE TNAP3_MOUSE] Ubiquitin-editing enzyme that contains both ubiquitin ligase and deubiquitinase activities. Involved in immune and inflammatory responses signaled by cytokines, such as TNF-alpha and IL-1 beta, or pathogens via Toll-like receptors (TLRs) through terminating NF-kappa-B activity. Essential component of a ubiquitin-editing protein complex, comprising also RNF11, ITCH and TAX1BP1, that ensures the transient nature of inflammatory signaling pathways. In cooperation with TAX1BP1 promotes disassembly of E2-E3 ubiquitin protein ligase complexes in IL-1R and TNFR-1 pathways; affected are at least E3 ligases TRAF6, TRAF2 and BIRC2, and E2 ubiquitin-conjugating enzymes UBE2N and UBE2D3. In cooperation with TAX1BP1 promotes ubiquitination of UBE2N and proteasomal degradation of UBE2N and UBE2D3. Upon TNF stimulation, deubiquitinates 'Lys-63'-polyubiquitin chains on RIPK1 and catalyzes the formation of 'Lys-48'-polyubiquitin chains. This leads to RIPK1 proteasomal degradation and consequently termination of the TNF- or LPS-mediated activation of NF-kappa-B. Deubiquitinates TRAF6 probably acting on 'Lys-63'-linked polyubiquitin. Upon T-cell receptor (TCR)-mediated T-cell activation, deubiquitinates 'Lys-63'-polyubiquitin chains on MALT1 thereby mediating disassociation of the CBM (CARD11:BCL10:MALT1) and IKK complexes and preventing sustained IKK activation. Deubiquitinates NEMO/IKBKG; the function is facilitated by TNIP1 and leads to inhibition of NF-kappa-B activation. Upon stimulation by bacterial peptidoglycans, probably deubiquitinates RIPK2. Can also inhibit I-kappa-B-kinase (IKK) through a non-catalytic mechanism which involves polyubiquitin; polyubiquitin promotes association with IKBKG and prevents IKK MAP3K7-mediated phosphorylation. Targets TRAF2 for lysosomal degradation. In vitro able to deubiquitinate 'Lys-11'-, 'Lys-48'- and 'Lys-63' polyubiquitin chains. Inhibitor of programmed cell death. Has a role in the function of the lymphoid system. Required for LPS-induced production of proinflammatory cytokines and IFN beta in LPS-tolerized macrophages.<ref>PMID:10385526</ref> <ref>PMID:11389905</ref> <ref>PMID:15334086</ref> <ref>PMID:18342009</ref> <ref>PMID:20185725</ref> <ref>PMID:23609450</ref>
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Authors: Mabbitt, P.D., Jackson, C.J.
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==See Also==
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*[[Beta secretase 3D structures|Beta secretase 3D structures]]
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Description: Mus musculus A20 OTU domain
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== References ==
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[[Category: Unreleased Structures]]
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<references/>
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[[Category: Jackson, C.J]]
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__TOC__
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[[Category: Mabbitt, P.D]]
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Mus musculus]]
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[[Category: Jackson CJ]]
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[[Category: Mabbitt PD]]

Current revision

Mus musculus A20 OTU domain

PDB ID 5dq6

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