2o0m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:23, 17 October 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2o0m.gif|left|200px]]
 
-
{{Structure
+
==The crystal structure of the putative SorC family transcriptional regulator from Enterococcus faecalis==
-
|PDB= 2o0m |SIZE=350|CAPTION= <scene name='initialview01'>2o0m</scene>, resolution 1.60&Aring;
+
<StructureSection load='2o0m' size='340' side='right'caption='[[2o0m]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
+
<table><tr><td colspan='2'>[[2o0m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis_V583 Enterococcus faecalis V583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O0M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O0M FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2390 DeoR], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam04198 Sugar-bind], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3388 COG3388]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o0m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o0m OCA], [https://pdbe.org/2o0m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o0m RCSB], [https://www.ebi.ac.uk/pdbsum/2o0m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o0m ProSAT], [https://www.topsan.org/Proteins/MCSG/2o0m TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o0m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o0m OCA], [http://www.ebi.ac.uk/pdbsum/2o0m PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2o0m RCSB]</span>
+
</table>
-
}}
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q833I7_ENTFA Q833I7_ENTFA]
-
'''The crystal structure of the putative SorC family transcriptional regulator from Enterococcus faecalis'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2O0M is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O0M OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o0/2o0m_consurf.spt"</scriptWhenChecked>
-
[[Category: Enterococcus faecalis]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Bargassa, M.]]
+
</jmolCheckbox>
-
[[Category: Joachimiak, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o0m ConSurf].
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: Zhang, R.]]
+
__TOC__
-
[[Category: Zhou, M.]]
+
</StructureSection>
-
[[Category: mcsg]]
+
[[Category: Enterococcus faecalis V583]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Large Structures]]
-
[[Category: protein structure initiative]]
+
[[Category: Bargassa M]]
-
[[Category: psi-2]]
+
[[Category: Joachimiak A]]
-
[[Category: sorc family]]
+
[[Category: Zhang R]]
-
[[Category: structural genomic]]
+
[[Category: Zhou M]]
-
[[Category: transcriptional regulator]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:35:24 2008''
+

Current revision

The crystal structure of the putative SorC family transcriptional regulator from Enterococcus faecalis

PDB ID 2o0m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools