2o6k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:15, 21 November 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2o6k.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of UPF0346 from Staphylococcus aureus. Northeast Structural Genomics target ZR218.==
-
|PDB= 2o6k |SIZE=350|CAPTION= <scene name='initialview01'>2o6k</scene>, resolution 2.100&Aring;
+
<StructureSection load='2o6k' size='340' side='right'caption='[[2o6k]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2o6k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_MW2 Staphylococcus aureus subsp. aureus MW2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O6K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O6K FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
|GENE= MW1311 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4479 COG4479]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o6k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o6k OCA], [https://pdbe.org/2o6k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o6k RCSB], [https://www.ebi.ac.uk/pdbsum/2o6k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o6k ProSAT], [https://www.topsan.org/Proteins/NESGC/2o6k TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o6k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o6k OCA], [http://www.ebi.ac.uk/pdbsum/2o6k PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2o6k RCSB]</span>
+
</table>
-
}}
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Y1311_STAAW Y1311_STAAW]
-
'''Crystal structure of UPF0346 from Staphylococcus aureus. Northeast Structural Genomics target ZR218.'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2O6K is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O6K OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o6/2o6k_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Staphylococcus aureus]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Abashidze, M.]]
+
</jmolCheckbox>
-
[[Category: Acton, T B.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o6k ConSurf].
-
[[Category: Baran, M C.]]
+
<div style="clear:both"></div>
-
[[Category: Benach, J.]]
+
__TOC__
-
[[Category: Cunningham, K.]]
+
</StructureSection>
-
[[Category: Fang, Y.]]
+
[[Category: Large Structures]]
-
[[Category: Hunt, J F.]]
+
[[Category: Staphylococcus aureus subsp. aureus MW2]]
-
[[Category: Ma, L C.]]
+
[[Category: Abashidze M]]
-
[[Category: Montelione, G T.]]
+
[[Category: Acton TB]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Baran MC]]
-
[[Category: Rost, B.]]
+
[[Category: Benach J]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Cunningham K]]
-
[[Category: Tong, L.]]
+
[[Category: Fang Y]]
-
[[Category: Wang, D.]]
+
[[Category: Hunt JF]]
-
[[Category: Xiao, R.]]
+
[[Category: Ma L-C]]
-
[[Category: nesg]]
+
[[Category: Montelione GT]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Rost B]]
-
[[Category: protein structure initiative]]
+
[[Category: Seetharaman J]]
-
[[Category: psi-2]]
+
[[Category: Tong L]]
-
[[Category: structural genomic]]
+
[[Category: Wang D]]
-
[[Category: zr218]]
+
[[Category: Xiao R]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:36:00 2008''
+

Current revision

Crystal structure of UPF0346 from Staphylococcus aureus. Northeast Structural Genomics target ZR218.

PDB ID 2o6k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2o6k"
Personal tools