2o8r

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[[Image:2o8r.gif|left|200px]]
 
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{{Structure
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==Crystal Structure of Polyphosphate Kinase from Porphyromonas Gingivalis==
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|PDB= 2o8r |SIZE=350|CAPTION= <scene name='initialview01'>2o8r</scene>, resolution 2.70&Aring;
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<StructureSection load='2o8r' size='340' side='right'caption='[[2o8r]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
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<table><tr><td colspan='2'>[[2o8r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O8R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O8R FirstGlance]. <br>
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Polyphosphate_kinase Polyphosphate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.1 2.7.4.1] </span>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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|GENE= ppk ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=837 Porphyromonas gingivalis])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK05443 PRK05443]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o8r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o8r OCA], [https://pdbe.org/2o8r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o8r RCSB], [https://www.ebi.ac.uk/pdbsum/2o8r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o8r ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2o8r TOPSAN]</span></td></tr>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o8r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o8r OCA], [http://www.ebi.ac.uk/pdbsum/2o8r PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2o8r RCSB]</span>
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</table>
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}}
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== Function ==
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[https://www.uniprot.org/uniprot/Q7MTR1_PORGI Q7MTR1_PORGI] Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP).[RuleBase:RU003800]
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'''Crystal Structure of Polyphosphate Kinase from Porphyromonas Gingivalis'''
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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==About this Structure==
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<jmolCheckbox>
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2O8R is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O8R OCA].
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o8/2o8r_consurf.spt"</scriptWhenChecked>
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[[Category: Polyphosphate kinase]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o8r ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Porphyromonas gingivalis]]
[[Category: Porphyromonas gingivalis]]
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[[Category: Single protein]]
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[[Category: Adams JM]]
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[[Category: Adams, J M.]]
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[[Category: Almo SC]]
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[[Category: Almo, S C.]]
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[[Category: Burley SK]]
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[[Category: Burley, S K.]]
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[[Category: Dickey M]]
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[[Category: Dickey, M.]]
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[[Category: Ozyurt S]]
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[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
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[[Category: Patskovsky Y]]
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[[Category: Nysgrc, New York Structural Genomics Research Consortium.]]
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[[Category: Sauder JM]]
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[[Category: Ozyurt, S.]]
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[[Category: Toro R]]
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[[Category: Patskovsky, Y.]]
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[[Category: Wasserman SR]]
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[[Category: Sauder, J M.]]
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[[Category: Toro, R.]]
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[[Category: Wasserman, S R.]]
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[[Category: kinase]]
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[[Category: new york structural genomics research consortium]]
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[[Category: new york structural genomix research consortium]]
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[[Category: nysgrc]]
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[[Category: nysgxrc]]
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[[Category: protein structure initiative]]
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[[Category: psi]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:36:03 2008''
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Current revision

Crystal Structure of Polyphosphate Kinase from Porphyromonas Gingivalis

PDB ID 2o8r

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OCA

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