We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.
5dpk
From Proteopedia
(Difference between revisions)
proteopedia linkproteopedia link
|
|
| (4 intermediate revisions not shown.) |
| Line 1: |
Line 1: |
| - | ==MutY adenine glycosylase bound to a transition state analog (1N) paired with d(8-oxoG) in duplexed DNA to 2.2 A==
| + | #REDIRECT [[6u7t]] This PDB entry is obsolete and replaced by 6u7t |
| - | <StructureSection load='5dpk' size='340' side='right' caption='[[5dpk]], [[Resolution|resolution]] 2.20Å' scene=''>
| + | |
| - | == Structural highlights ==
| + | |
| - | <table><tr><td colspan='2'>[[5dpk]] is a 3 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3fsq 3fsq]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DPK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DPK FirstGlance]. <br>
| + | |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
| + | |
| - | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=8OG:8-OXO-2-DEOXY-GUANOSINE-5-MONOPHOSPHATE'>8OG</scene>, <scene name='pdbligand=NR1:(3R,4R)-3-HYDROXY-4-[(PHOSPHONOOXY)METHYL]PYRROLIDINIUM'>NR1</scene></td></tr>
| + | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dpk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dpk OCA], [http://pdbe.org/5dpk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dpk RCSB], [http://www.ebi.ac.uk/pdbsum/5dpk PDBsum]</span></td></tr>
| + | |
| - | </table>
| + | |
| - | __TOC__
| + | |
| - | </StructureSection>
| + | |
| - | [[Category: Cao, S]]
| + | |
| - | [[Category: David, S S]]
| + | |
| - | [[Category: Horvath, M P]]
| + | |
| - | [[Category: Shea, V L.O]]
| + | |
| - | [[Category: Dna repair]]
| + | |
| - | [[Category: Glycosylase]]
| + | |
| - | [[Category: Hydrolase-dna complex]]
| + | |
| - | [[Category: Protein-dna complex]]
| + | |
| - | [[Category: Transition state analog]]
| + | |
Current revision
- REDIRECT 6u7t This PDB entry is obsolete and replaced by 6u7t
