2oqg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:25, 30 October 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2oqg.gif|left|200px]]
 
-
{{Structure
+
==ArsR-like Transcriptional Regulator from Rhodococcus sp. RHA1==
-
|PDB= 2oqg |SIZE=350|CAPTION= <scene name='initialview01'>2oqg</scene>, resolution 1.54&Aring;
+
<StructureSection load='2oqg' size='340' side='right'caption='[[2oqg]], [[Resolution|resolution]] 1.54&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2oqg]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_jostii_RHA1 Rhodococcus jostii RHA1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OQG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OQG FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.54&#8491;</td></tr>
-
|GENE= RHA1_ro04214 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1831 Rhodococcus sp.])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00090 HTH_ARSR]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oqg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oqg OCA], [https://pdbe.org/2oqg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oqg RCSB], [https://www.ebi.ac.uk/pdbsum/2oqg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oqg ProSAT], [https://www.topsan.org/Proteins/MCSG/2oqg TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2oqg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oqg OCA], [http://www.ebi.ac.uk/pdbsum/2oqg PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2oqg RCSB]</span>
+
</table>
-
}}
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q0S8Y1_RHOJR Q0S8Y1_RHOJR]
-
'''ArsR-like Transcriptional Regulator from Rhodococcus sp. RHA1'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2OQG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rhodococcus_sp. Rhodococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OQG OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oq/2oqg_consurf.spt"</scriptWhenChecked>
-
[[Category: Rhodococcus sp.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Edwards, A.]]
+
</jmolCheckbox>
-
[[Category: Joachimiak, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oqg ConSurf].
-
[[Category: Kim, Y.]]
+
<div style="clear:both"></div>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
__TOC__
-
[[Category: Savchenko, A.]]
+
</StructureSection>
-
[[Category: Xu, X.]]
+
[[Category: Large Structures]]
-
[[Category: Zheng, H.]]
+
[[Category: Rhodococcus jostii RHA1]]
-
[[Category: mcsg]]
+
[[Category: Edwards A]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: protein structure initiative]]
+
[[Category: Kim Y]]
-
[[Category: psi-2]]
+
[[Category: Savchenko A]]
-
[[Category: structural genomic]]
+
[[Category: Xu X]]
-
[[Category: transcription]]
+
[[Category: Zheng H]]
-
[[Category: winged-helix-turn-helix]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:37:15 2008''
+

Current revision

ArsR-like Transcriptional Regulator from Rhodococcus sp. RHA1

PDB ID 2oqg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools