5dul

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: ==1-deoxy-D-xylulose 5-phosphate reductoisomerase from Yersinia pestis in complex with NADPH== <StructureSection load='5dul' size='340' side='right' caption='5dul, [[Resolution|resolut...)
Current revision (22:00, 28 June 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==1-deoxy-D-xylulose 5-phosphate reductoisomerase from Yersinia pestis in complex with NADPH==
==1-deoxy-D-xylulose 5-phosphate reductoisomerase from Yersinia pestis in complex with NADPH==
-
<StructureSection load='5dul' size='340' side='right' caption='[[5dul]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+
<StructureSection load='5dul' size='340' side='right'caption='[[5dul]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5dul]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DUL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DUL FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5dul]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DUL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DUL FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3iie|3iie]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/1-deoxy-D-xylulose-5-phosphate_reductoisomerase 1-deoxy-D-xylulose-5-phosphate reductoisomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.267 1.1.1.267] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dul FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dul OCA], [https://pdbe.org/5dul PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dul RCSB], [https://www.ebi.ac.uk/pdbsum/5dul PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dul ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dul FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dul OCA], [http://pdbe.org/5dul PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dul RCSB], [http://www.ebi.ac.uk/pdbsum/5dul PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/DXR_YERPE DXR_YERPE]] Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).[HAMAP-Rule:MF_00183]
+
[https://www.uniprot.org/uniprot/DXR_YERPE DXR_YERPE] Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).[HAMAP-Rule:MF_00183]
 +
 
 +
==See Also==
 +
*[[DXP reductoisomerase 3D Structures|DXP reductoisomerase 3D Structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 1-deoxy-D-xylulose-5-phosphate reductoisomerase]]
+
[[Category: Large Structures]]
-
[[Category: Anderson, W F]]
+
[[Category: Yersinia pestis]]
-
[[Category: Structural genomic]]
+
[[Category: Anderson WF]]
-
[[Category: Joachimiak, A]]
+
[[Category: Joachimiak A]]
-
[[Category: Mulligan, R]]
+
[[Category: Mulligan R]]
-
[[Category: Osipiuk, J]]
+
[[Category: Osipiuk J]]
-
[[Category: Stam, J]]
+
[[Category: Stam J]]
-
[[Category: Csgid]]
+
-
[[Category: Idp00499]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Reductoisomerase]]
+
-
[[Category: Xylulose]]
+

Current revision

1-deoxy-D-xylulose 5-phosphate reductoisomerase from Yersinia pestis in complex with NADPH

PDB ID 5dul

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools