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5ca8

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Structures of the yeast dynamin-like GTPase Sey1p in complex with GDP

Structural highlights

5ca8 is a 1 chain structure with sequence from Candida albicans SC5314. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	X-ray diffraction, Resolution 2.3Å
Ligands:	,
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

SEY1_CANAL Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization (By similarity). Required for virulence and resistance to cycloheximide.[HAMAP-Rule:MF_03109]^[1]

Publication Abstract from PubMed

Homotypic membrane fusion of the endoplasmic reticulum is mediated by dynamin-like guanosine triphosphatases (GTPases), which include atlastin (ATL) in metazoans and Sey1p in yeast. In this paper, we determined the crystal structures of the cytosolic domain of Sey1p derived from Candida albicans. The structures reveal a stalk-like, helical bundle domain following the GTPase, which represents a previously unidentified configuration of the dynamin superfamily. This domain is significantly longer than that of ATL and critical for fusion. Sey1p forms a side-by-side dimer in complex with GMP-PNP or GDP/AlF4 (-) but is monomeric with GDP. Surprisingly, Sey1p could mediate fusion without GTP hydrolysis, even though fusion was much more efficient with GTP. Sey1p was able to replace ATL in mammalian cells, and the punctate localization of Sey1p was dependent on its GTPase activity. Despite the common function of fusogenic GTPases, our results reveal unique features of Sey1p.

Structures of the yeast dynamin-like GTPase Sey1p provide insight into homotypic ER fusion.,Yan L, Sun S, Wang W, Shi J, Hu X, Wang S, Su D, Rao Z, Hu J, Lou Z J Cell Biol. 2015 Sep 14;210(6):961-72. doi: 10.1083/jcb.201502078. PMID:26370501^[2]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Yamada-Okabe T, Yamada-Okabe H. Characterization of the CaNAG3, CaNAG4, and CaNAG6 genes of the pathogenic fungus Candida albicans: possible involvement of these genes in the susceptibilities of cytotoxic agents. FEMS Microbiol Lett. 2002 Jun 18;212(1):15-21. PMID:12076781
↑ Yan L, Sun S, Wang W, Shi J, Hu X, Wang S, Su D, Rao Z, Hu J, Lou Z. Structures of the yeast dynamin-like GTPase Sey1p provide insight into homotypic ER fusion. J Cell Biol. 2015 Sep 14;210(6):961-72. doi: 10.1083/jcb.201502078. PMID:26370501 doi:http://dx.doi.org/10.1083/jcb.201502078

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5ca8"

Categories: Candida albicans SC5314 | Large Structures | Yan L

@@ Line 1: / Line 1: @@
 ==Structures of the yeast dynamin-like GTPase Sey1p in complex with GDP==
-<StructureSection load='5ca8' size='340' side='right' caption='[[5ca8]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+<StructureSection load='5ca8' size='340' side='right'caption='[[5ca8]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5ca8]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CA8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5CA8 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5ca8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Candida_albicans_SC5314 Candida albicans SC5314]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CA8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5CA8 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ca9|5ca9]], [[5cb2|5cb2]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dynamin_GTPase Dynamin GTPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.5.5 3.6.5.5] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ca8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ca8 OCA], [https://pdbe.org/5ca8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ca8 RCSB], [https://www.ebi.ac.uk/pdbsum/5ca8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ca8 ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ca8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ca8 OCA], [http://pdbe.org/5ca8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ca8 RCSB], [http://www.ebi.ac.uk/pdbsum/5ca8 PDBsum]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/SEY1_CANAL SEY1_CANAL]] Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization (By similarity). Required for virulence and resistance to cycloheximide.[HAMAP-Rule:MF_03109]<ref>PMID:12076781</ref>
+[https://www.uniprot.org/uniprot/SEY1_CANAL SEY1_CANAL] Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization (By similarity). Required for virulence and resistance to cycloheximide.[HAMAP-Rule:MF_03109]<ref>PMID:12076781</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 23: / Line 23: @@
 __TOC__
 </StructureSection>
-[[Category: Dynamin GTPase]]
+[[Category: Candida albicans SC5314]]
-[[Category: Yan, L]]
+[[Category: Large Structures]]
-[[Category: Dynamin]]
+[[Category: Yan L]]
-[[Category: Er]]
-[[Category: Homo-fusion]]
-[[Category: Hydrolase]]

5ca8

From Proteopedia

Current revision

Structures of the yeast dynamin-like GTPase Sey1p in complex with GDP

Structural highlights

Function

Publication Abstract from PubMed

References

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