2pdo
From Proteopedia
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| - | [[Image:2pdo.gif|left|200px]] | ||
| - | + | ==Crystal Structure of the Putative Acetyltransferase of GNAT Family from Shigella flexneri== | |
| - | + | <StructureSection load='2pdo' size='340' side='right'caption='[[2pdo]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | | | + | <table><tr><td colspan='2'>[[2pdo]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_2a_str._2457t Shigella flexneri 2a str. 2457t]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PDO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PDO FirstGlance]. <br> |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
| - | | | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ypeA, SF2487, S_2635 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=198215 Shigella flexneri 2a str. 2457T])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pdo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pdo OCA], [https://pdbe.org/2pdo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pdo RCSB], [https://www.ebi.ac.uk/pdbsum/2pdo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pdo ProSAT], [https://www.topsan.org/Proteins/MCSG/2pdo TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | == | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pd/2pdo_consurf.spt"</scriptWhenChecked> |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: Holzle, D | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pdo ConSurf]. |
| - | [[Category: Joachimiak, A | + | <div style="clear:both"></div> |
| - | [[Category: Kim, Y | + | __TOC__ |
| - | [[Category: Li, H | + | </StructureSection> |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Shigella flexneri 2a str. 2457t]] |
| - | [[Category: | + | [[Category: Holzle, D]] |
| - | [[Category: | + | [[Category: Joachimiak, A]] |
| - | + | [[Category: Kim, Y]] | |
| - | [[Category: | + | [[Category: Li, H]] |
| - | + | [[Category: Structural genomic]] | |
| - | + | [[Category: Alpha-beta-alpha sandwich]] | |
| - | + | [[Category: Mcsg]] | |
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Transferase]] | ||
Current revision
Crystal Structure of the Putative Acetyltransferase of GNAT Family from Shigella flexneri
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