2pjq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:29, 30 October 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2pjq.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of Q88U62_LACPL from Lactobacillus plantarum. Northeast Structural Genomics target LpR71==
-
|PDB= 2pjq |SIZE=350|CAPTION= <scene name='initialview01'>2pjq</scene>, resolution 2.800&Aring;
+
<StructureSection load='2pjq' size='340' side='right'caption='[[2pjq]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2pjq]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactiplantibacillus_plantarum_WCFS1 Lactiplantibacillus plantarum WCFS1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PJQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PJQ FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
|GENE= lp_2664 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1590 Lactobacillus plantarum])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1418 COG1418]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pjq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pjq OCA], [https://pdbe.org/2pjq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pjq RCSB], [https://www.ebi.ac.uk/pdbsum/2pjq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pjq ProSAT], [https://www.topsan.org/Proteins/NESGC/2pjq TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pjq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pjq OCA], [http://www.ebi.ac.uk/pdbsum/2pjq PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2pjq RCSB]</span>
+
</table>
-
}}
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/F9URF4_LACPL F9URF4_LACPL]
-
'''Crystal structure of Q88U62_LACPL from Lactobacillus plantarum. Northeast Structural Genomics target LpR71'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2PJQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Lactobacillus_plantarum Lactobacillus plantarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PJQ OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pj/2pjq_consurf.spt"</scriptWhenChecked>
-
[[Category: Lactobacillus plantarum]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Acton, T B.]]
+
</jmolCheckbox>
-
[[Category: Baran, M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pjq ConSurf].
-
[[Category: Benach, J.]]
+
<div style="clear:both"></div>
-
[[Category: Chen, C X.]]
+
__TOC__
-
[[Category: Cunningham, K.]]
+
</StructureSection>
-
[[Category: Forouhar, F.]]
+
[[Category: Lactiplantibacillus plantarum WCFS1]]
-
[[Category: Hunt, J F.]]
+
[[Category: Large Structures]]
-
[[Category: Ma, L-C.]]
+
[[Category: Acton TB]]
-
[[Category: Montelione, G T.]]
+
[[Category: Baran M]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Benach J]]
-
[[Category: Owens, L.]]
+
[[Category: Chen CX]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Cunningham K]]
-
[[Category: Su, M.]]
+
[[Category: Forouhar F]]
-
[[Category: Tong, L.]]
+
[[Category: Hunt JF]]
-
[[Category: lpr71]]
+
[[Category: Ma L-C]]
-
[[Category: nesg]]
+
[[Category: Montelione GT]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Owens L]]
-
[[Category: protein structure initiative]]
+
[[Category: Seetharaman J]]
-
[[Category: psi-2]]
+
[[Category: Su M]]
-
[[Category: structural genomic]]
+
[[Category: Tong L]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:39:55 2008''
+

Current revision

Crystal structure of Q88U62_LACPL from Lactobacillus plantarum. Northeast Structural Genomics target LpR71

PDB ID 2pjq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools