5a6u
From Proteopedia
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==Native mammalian ribosome-bound Sec61 protein-conducting channel in the 'non-inserting' state== | ==Native mammalian ribosome-bound Sec61 protein-conducting channel in the 'non-inserting' state== | ||
- | < | + | <SX load='5a6u' size='340' side='right' viewer='molstar' caption='[[5a6u]], [[Resolution|resolution]] 9.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[5a6u]] is a 3 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5a6u]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Canis_lupus_familiaris Canis lupus familiaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A6U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5A6U FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 9Å</td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5a6u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a6u OCA], [https://pdbe.org/5a6u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5a6u RCSB], [https://www.ebi.ac.uk/pdbsum/5a6u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5a6u ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/S61A1_CANLF S61A1_CANLF] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | In mammalian cells, secretory and membrane proteins are translocated across or inserted into the endoplasmic reticulum (ER) membrane by the universally conserved protein-conducting channel Sec61, which has been structurally studied in isolated, detergent-solubilized states. Here we structurally and functionally characterize native, non-solubilized ribosome-Sec61 complexes on rough ER vesicles using cryo-electron tomography and ribosome profiling. Surprisingly, the 9-A resolution subtomogram average reveals Sec61 in a laterally open conformation, even though the channel is not in the process of inserting membrane proteins into the lipid bilayer. In contrast to recent mechanistic models for polypeptide translocation and insertion, our results indicate that the laterally open conformation of Sec61 is the only conformation present in the ribosome-bound translocon complex, independent of its functional state. Consistent with earlier functional studies, our structure suggests that the ribosome alone, even without a nascent chain, is sufficient for lateral opening of Sec61 in a lipid environment. | ||
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+ | Structure of the native Sec61 protein-conducting channel.,Pfeffer S, Burbaum L, Unverdorben P, Pech M, Chen Y, Zimmermann R, Beckmann R, Forster F Nat Commun. 2015 Sep 28;6:8403. doi: 10.1038/ncomms9403. PMID:26411746<ref>PMID:26411746</ref> | ||
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+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 5a6u" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
- | </ | + | </SX> |
[[Category: Canis lupus familiaris]] | [[Category: Canis lupus familiaris]] | ||
- | [[Category: Beckmann | + | [[Category: Large Structures]] |
- | [[Category: Burbaum | + | [[Category: Beckmann R]] |
- | [[Category: Chen | + | [[Category: Burbaum L]] |
- | [[Category: Foerster | + | [[Category: Chen Y]] |
- | [[Category: Pech | + | [[Category: Foerster F]] |
- | [[Category: Pfeffer | + | [[Category: Pech M]] |
- | [[Category: Unverdorben | + | [[Category: Pfeffer S]] |
- | [[Category: Zimmermann | + | [[Category: Unverdorben P]] |
- | + | [[Category: Zimmermann R]] | |
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Current revision
Native mammalian ribosome-bound Sec61 protein-conducting channel in the 'non-inserting' state
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