2qf9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:32, 30 October 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qf9.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of putative secreted protein DUF305 from Streptomyces coelicolor==
-
|PDB= 2qf9 |SIZE=350|CAPTION= <scene name='initialview01'>2qf9</scene>, resolution 1.690&Aring;
+
<StructureSection load='2qf9' size='340' side='right'caption='[[2qf9]], [[Resolution|resolution]] 1.69&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QF9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QF9 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.69&#8491;</td></tr>
-
|GENE= SCO2239, SC1G2.01c, SCBAC17D6.06c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1902 Streptomyces coelicolor])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03713 DUF305], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3544 COG3544]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qf9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qf9 OCA], [https://pdbe.org/2qf9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qf9 RCSB], [https://www.ebi.ac.uk/pdbsum/2qf9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qf9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2qf9 TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qf9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qf9 OCA], [http://www.ebi.ac.uk/pdbsum/2qf9 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2qf9 RCSB]</span>
+
</table>
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''Crystal structure of putative secreted protein DUF305 from Streptomyces coelicolor'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qf/2qf9_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
2QF9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QF9 OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Streptomyces coelicolor]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qf9 ConSurf].
-
[[Category: Adams, J.]]
+
<div style="clear:both"></div>
-
[[Category: Almo, S C.]]
+
__TOC__
-
[[Category: Burley, S K.]]
+
</StructureSection>
-
[[Category: Groshong, C.]]
+
[[Category: Large Structures]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Adams J]]
-
[[Category: Ramagopal, U A.]]
+
[[Category: Almo SC]]
-
[[Category: Rutter, M.]]
+
[[Category: Burley SK]]
-
[[Category: Sauder, J M.]]
+
[[Category: Groshong C]]
-
[[Category: Toro, R.]]
+
[[Category: Ramagopal UA]]
-
[[Category: duf305]]
+
[[Category: Rutter M]]
-
[[Category: new york structural genomix research consortium]]
+
[[Category: Sauder JM]]
-
[[Category: nysgxrc]]
+
[[Category: Toro R]]
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: q8ck01]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:42:39 2008''
+

Current revision

Crystal structure of putative secreted protein DUF305 from Streptomyces coelicolor

PDB ID 2qf9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qf9"
Personal tools